RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 RLN1P04808 185 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 EIF2S3P41091 472 aaKnown RBP7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 SLC6A8P48029 635 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 HLCSP50747 726 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 OR2B6P58173 313 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 KCNAB2Q13303 367 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 OLFML2AQ68BL7 652 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 TCTN3Q6NUS6 607 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 MYO7BQ6PIF6 2116 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF550Q7Z398 422 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF676Q8N7Q3 588 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 PROKR2Q8NFJ6 384 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 GPR32P1Q8NGA4 272 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 C7orf34Q96L11 122 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 LMF1Q96S06 567 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 CHID1Q9BWS9 393 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 LAT2Q9GZY6 243 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 RNPEPL1Q9HAU8 725 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 PDP1Q9P0J1 537 aaPredicted RBP7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 PCDHGB5Q9Y5G0 923 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 LRRK2Q5S007 2527 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 ARRDC5A6NEK1 342 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 TNFRSF11BO00300 401 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 WWP2O00308 870 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 FCMRO60667 390 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 OXSR1O95747 527 aaPredicted RBP7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 CD2P06729 351 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 PPP3R1P63098 170 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 SIRPAP78324 504 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 RPS19BP1Q86WX3 136 aaKnown RBP7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 PIGXQ8TBF5 258 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 UBASH3BQ8TF42 649 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 THEM6Q8WUY1 208 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 SNRNP27Q8WVK2 155 aaKnown RBP7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 SGCZQ96LD1 299 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF559Q9BR84 538 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 CCDC86Q9H6F5 360 aaKnown RBP7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 C12orf10Q9HB07 376 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 ABCB9Q9NP78 766 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 DNAJB12Q9NXW2 375 aaKnown RBP7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 ERVK-18Q9QC07 812 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 DNAJB9Q9UBS3 223 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 KCNE5Q9UJ90 142 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 PCDHGB7Q9Y5F8 929 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 PCDHGB6Q9Y5F9 930 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 WDR87Q6ZQQ6 2873 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 ITGA10O75578 1167 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 CSN2P05814 226 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 ADORA3P0DMS8 318 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 RHCEP18577 417 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 OR12D2P58182 307 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 ARMCX4Q5H9R4 360 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 CCNJQ5T5M9 372 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 IGFL2Q6UWQ7 119 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 OR51A7Q8NH64 312 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 PAQR8Q8TEZ7 354 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 CANT1Q8WVQ1 401 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 ARSGQ96EG1 525 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 THOC3Q96J01 351 aaKnown RBP7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 EPYCQ99645 322 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 MESP1Q9BRJ9 268 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 GABARAPL1Q9H0R8 117 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 EFSO43281 561 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 ICOSLGO75144 302 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 OR2J2O76002 312 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 DIRAS1O95057 198 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 ITGA5P08648 1049 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF16P17020 682 aaPredicted RBP7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 GAS1P54826 345 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 PRAMEF20Q5VT98 475 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 VASH2Q86V25 355 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 SVOPLQ8N434 492 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 TMEM41AQ96HV5 264 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 CLCC1Q96S66 551 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 CDCP1Q9H5V8 836 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 MKLN1Q9UL63 735 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 ENO4A6NNW6 628 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 KRT36O76013 467 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 EPPINO95925 133 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 GGT2P36268 569 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 VHLP40337 213 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF846Q147U1 533 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 VRK2Q86Y07 508 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF101Q8IZC7 436 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 POGLUT1Q8NBL1 392 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 BRIX1Q8TDN6 353 aaKnown RBP7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 PSMF1Q92530 271 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 PRRC1Q96M27 445 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF570Q96NI8 536 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 IL4I1Q96RQ9 567 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 PDCD10Q9BUL8 212 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 KLHL4Q9C0H6 718 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 COQ3Q9NZJ6 369 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 RIMS3Q9UJD0 308 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 CNOT11Q9UKZ1 510 aaKnown RBP7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 CHST2Q9Y4C5 530 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 PRAMEF25A6NGN4 478 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 ADAMDEC1O15204 470 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 RNF13O43567 381 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 CSTBP04080 98 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms