RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PTPN13Q12923 2485 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 H7BY64 318 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CASRP41180 1078 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 RPL23AP62750 156 aaKnown RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 ERV3-1Q14264 604 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 OR4D1Q15615 310 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CPZQ66K79 652 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 LARP4Q71RC2 724 aaKnown RBP eCLIP5.35□□□□□ -1.55
VCAN-201ENST00000265077 TMEM173Q86WV6 379 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 CARFQ8N187 725 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ZNF461Q8TAF7 563 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 TRMT2BQ96GJ1 504 aaKnown RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 PRAP1Q96NZ9 151 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 FAM83CQ9BQN1 747 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 TRBV23-1A0A0A0MS06 115 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ZCWPW2A0A1B0GU75 182 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 A0A1W2PPQ1 181 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CDHR4A6H8M9 788 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CD8B2A6NJW9 211 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ACOT8O14734 319 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 S1PR4O95977 384 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CSTAP01040 98 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 SFTPBP07988 381 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CD3GP09693 182 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CD8BP10966 210 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ZNF44P15621 663 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CDKN1CP49918 316 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 PRPS1P60891 318 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 MEF2DQ14814 521 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 MPPED2Q15777 294 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 LRRC73Q5JTD7 316 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 C9orf62Q8N4C0 152 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 NUP43Q8NFH3 380 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 B3GNT7Q8NFL0 401 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 NINJ1Q92982 152 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 FUBP1Q96AE4 644 aaKnown RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 BORCS8Q96FH0 119 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 DPH2Q9BQC3 489 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 TSPAN10Q9H1Z9 355 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 C19orf25Q9UFG5 118 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 PLEKHM1Q9Y4G2 1056 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 GPR45Q9Y5Y3 372 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 LNP1A1A4G5 178 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 SCAF4O95104 1147 aaKnown RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 CST2P09228 141 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 GABRB1P18505 474 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CLRN1P58418 232 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 RPS21P63220 83 aaKnown RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 MLLT11Q13015 90 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 OR52W1Q6IF63 320 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 DPY19L2P1Q6NXN4 242 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 TRILQ7L0X0 811 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 TPRA1Q86W33 373 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 KLBQ86Z14 1044 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 SERPINA12Q8IW75 414 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CCDC71LQ8N9Z2 235 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 OR5H2Q8NGV7 314 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 BPIFA2Q96DR5 249 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 OR2A14Q96R47 310 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 GSTO2Q9H4Y5 243 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 LMAN1LQ9HAT1 526 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 A0A1B0GV50 99 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ICAM2P13598 275 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 IFNGR1P15260 489 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 AK4P27144 223 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 PTH2RP49190 550 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 SEMG2Q02383 582 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ECHDC3Q96DC8 303 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 MVB12BQ9H7P6 319 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 RRAGCQ9HB90 399 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ISYNA1Q9NPH2 558 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 FBXL12Q9NXK8 326 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CREB5Q02930 508 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 RAB40BQ12829 278 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CRHR2Q13324 411 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 UBXN2BQ14CS0 331 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 MOGAT2Q3SYC2 334 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 RPS27LQ71UM5 84 aaKnown RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 OR2T4Q8NH00 348 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 OR52P1PQ8NH57 321 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 OR51A7Q8NH64 312 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 HOXB13Q92826 284 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 C9J4A7 227 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 RAD51DO75771 328 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 F2P00734 622 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 DRD2P14416 443 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 APEX1P27695 318 aaKnown RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 ACVR1BP36896 505 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 LIPAP38571 399 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 MGAT3Q09327 533 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 TMEM31Q5JXX7 168 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 DPPA4Q7L190 304 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 PLA2G15Q8NCC3 412 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 WDR20Q8TBZ3 569 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ZNF596Q8TC21 504 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 FOXRED1Q96CU9 486 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 PTGES2Q9H7Z7 377 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 KCMF1Q9P0J7 381 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 KCTD3Q9Y597 815 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 TNCP24821 2201 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms