RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 CBLCQ9ULV8 474 aa14.98□□□□□ -0.01
PDZRN3-201ENST00000263666 SLC35A3Q9Y2D2 325 aa14.98□□□□□ -0.01
PDZRN3-201ENST00000263666 OR5M10Q6IEU7 315 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 ALKAL2Q6UX46 152 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 PLCZ1Q86YW0 608 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 SFTPA2Q8IWL1 248 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 MORN4Q8NDC4 146 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 OR4D9Q8NGE8 314 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 CASTOR1Q8WTX7 329 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 EXO5Q9H790 373 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 SIRT4Q9Y6E7 314 aaPredicted RBP14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 A0A0A6YYD5 115 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 SHISA6Q6ZSJ9 500 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 SLC35D2Q76EJ3 337 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 RLN3Q8WXF3 142 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 DDOQ99489 341 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 AKAP7Q9P0M2 348 aaPredicted RBP14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 DPM1O60762 260 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 SBK2P0C263 348 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 TAS2R43P59537 309 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 SKP1P63208 163 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 DECR1Q16698 335 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 NIPAL3Q6P499 406 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 HCAR2Q8TDS4 363 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 ZDHHC1Q8WTX9 485 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 C5orf34Q96MH7 638 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 ABHD1Q96SE0 405 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 COMMD4Q9H0A8 199 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 RANBP3Q9H6Z4 567 aaPredicted RBP14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 C12orf4Q9NQ89 552 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 NPAP1Q9NZP6 1156 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 TP53BP1Q12888 1972 aaPredicted RBP14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 TRAV18A0A075B6X5 111 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 SCO2O43819 266 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 AP3S2P59780 193 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 KCNAB1Q14722 419 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 MS4A15Q8N5U1 240 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 CDRT4Q8N9R6 151 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 RNF32Q9H0A6 362 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 LHX9Q9NQ69 397 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 ASB4Q9Y574 426 aa14.97□□□□□ -0.01
PDZRN3-201ENST00000263666 CCKBRP32239 447 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 MAP3K8P41279 467 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 PPP2CBP62714 309 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 PPP2CAP67775 309 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 RUNX2Q13950 521 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 GPR18Q14330 331 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 WDR45BQ5MNZ6 344 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 ADAMTSL4Q6UY14 1074 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 SYNPRQ8TBG9 265 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 DIO2Q92813 273 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 SIGLEC11Q96RL6 698 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 MYADMQ96S97 322 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 TSPAN10Q9H1Z9 355 aaPredicted RBP14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 C8orf33Q9H7E9 229 aaPredicted RBP14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 EVA1BQ9NVM1 165 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 COMMD9Q9P000 198 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 GRHPRQ9UBQ7 328 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 LSM2Q9Y333 95 aaKnown RBP14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 MRPS2Q9Y399 296 aaKnown RBP14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 MAB21L2Q9Y586 359 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 SCN5AQ14524 2016 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 CDC40O60508 579 aaKnown RBP eCLIP14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 KRT33AO76009 404 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 NDUFB2O95178 105 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 CFIP05156 583 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 TBXA2RP21731 343 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 VAMP1P23763 118 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 PKLRP30613 574 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 AQP2P41181 271 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 TNFRSF17Q02223 184 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 BEX5Q5H9J7 111 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 ZNF765Q7L2R6 523 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 GALNTL5Q7Z4T8 443 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 LRRC56Q8IYG6 542 aaPredicted RBP14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 ZFAND1Q8TCF1 268 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 KLHDC7BQ96G42 594 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 RPP25Q9BUL9 199 aaKnown RBP14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 UBQLN2Q9UHD9 624 aa14.96□□□□□ -0.01
PDZRN3-201ENST00000263666 SHISA3A0PJX4 238 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 RHPN2P1A8MT19 583 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 C4orf51C9J302 202 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 NPIPB8E9PQR5 432 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 SLC43A1O75387 559 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 SPDEFO95238 335 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 OPN1LWP04000 364 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 CISD3P0C7P0 127 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 TEKQ02763 1124 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 NKPD1Q17RQ9 610 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 ARHGAP11AQ6P4F7 1023 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 ZNF767PQ75MW2 155 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 Q96M85 177 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 C1QTNF6Q9BXI9 259 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 WASH6PQ9NQA3 447 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 POT1Q9NUX5 634 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 ADAM29Q9UKF5 820 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 TRAPPC4Q9Y296 219 aa14.96□□□□□ -0.02
PDZRN3-201ENST00000263666 EML2O95834 649 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms