RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 LHPPQ9H008 270 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 ZNF337Q9Y3M9 751 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 TMEM72A0PK05 275 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 SH3D21A4FU49 640 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 BHLHE40O14503 412 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 SUSD5O60279 629 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 NPIPB7O75200 414 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 CCNA2P20248 432 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 SNAPC1Q16533 368 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 PLPPR5Q32ZL2 321 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 SLC25A30Q5SVS4 291 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 ATP1A1-AS1Q5TC04 95 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 POMZP3Q6PJE2 187 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 MDGA2Q7Z553 956 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 FAM26EQ8N5C1 309 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 KTI12Q96EK9 354 aaPredicted RBP20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 SLC38A2Q96QD8 506 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 NPAS1Q99742 590 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 CLN6Q9NWW5 311 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 TEKT2Q9UIF3 430 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 FBXL2Q9UKC9 423 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 CEP250Q9BV73 2442 aa20.76■□□□□ 0.91
SMARCB1-201ENST00000263121 ITGA3P26006 1051 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 APOBEC1P41238 236 aaKnown RBP20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 RPL5P46777 297 aaKnown RBP20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 ZNF41P51814 821 aaPredicted RBP20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 RPS4XP62701 263 aaKnown RBP20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 OCLNQ16625 522 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 ZNF227Q86WZ6 799 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 PLCZ1Q86YW0 608 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 LNX2Q8N448 690 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 CLEC1AQ8NC01 280 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 RHNO1Q9BSD3 238 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 TEX12Q9BXU0 123 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 ANKRD10Q9NXR5 420 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 STMN3Q9NZ72 180 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 VDAC3Q9Y277 283 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 DOCK10Q96BY6 2186 aa20.75■□□□□ 0.91
SMARCB1-201ENST00000263121 TRAV36DV7A0A075B6V5 113 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 DCDC2BA2VCK2 349 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 PTGES3LE9PB15 166 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 SNPHO15079 494 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 SURF4O15260 269 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 GRK5P34947 590 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 NR1H2P55055 460 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 LTBQ06643 244 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 FOXF1Q12946 379 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 SRSF6Q13247 344 aaKnown RBP20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 OR4K17Q8NGC6 315 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 TMEM163Q8TC26 289 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 STK35Q8TDR2 534 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 TAAR8Q969N4 342 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 NXPE2Q96DL1 559 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 C1GALT1C1Q96EU7 318 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 MRGPRX4Q96LA9 322 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 Q96MT0 163 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 MOGAT1Q96PD6 335 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 FKBP14Q9NWM8 211 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 PSORS1C1Q9UIG5 152 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 EML6Q6ZMW3 1958 aa20.74■□□□□ 0.91
SMARCB1-201ENST00000263121 ZC3H12DA2A288 527 aaKnown RBP20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 TRABD2BA6NFA1 517 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 A8MVM7 634 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 TLX2O43763 284 aaPredicted RBP20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 ENTPD6O75354 484 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 SLC25A12O75746 678 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 SNX4O95219 450 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 HMGN1P05114 100 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 ASAH2BP0C7U1 165 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 CYB561P49447 251 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 NUDT6P53370 316 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 ABHD17BQ5VST6 288 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 ZNF540Q8NDQ6 660 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 IPCEF1Q8WWN9 437 aaPredicted RBP20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 THAP4Q8WY91 577 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 TMEM41AQ96HV5 264 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 PTDSS2Q9BVG9 487 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 PTGES2Q9H7Z7 377 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 NDUFB2O95178 105 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 BGLAPP02818 100 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 SLC6A6P31641 620 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 PIGFQ07326 219 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 TBC1D25Q3MII6 688 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 C5orf46Q6UWT4 87 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 POC1BQ8TC44 478 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 SIGLEC11Q96RL6 698 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 IFT27Q9BW83 186 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 FKRPQ9H9S5 495 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 CCNB1IP1Q9NPC3 277 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 NANSQ9NR45 359 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 SACM1LQ9NTJ5 587 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 DNAJC27Q9NZQ0 273 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 CHRNA9Q9UGM1 479 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 ZNF229Q9UJW7 825 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 BAIAP2Q9UQB8 552 aa20.73■□□□□ 0.91
SMARCB1-201ENST00000263121 MPDZO75970 2070 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 CLCA1A8K7I4 914 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 P04436 131 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 RPS5P46782 204 aaKnown RBP20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 ALDH3B2P48448 385 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms