RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 EXT1Q16394 746 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 TIGD6Q17RP2 521 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 IGFN1Q86VF2 1251 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 PRSS33Q8NF86 280 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 OR52I1Q8NGK6 324 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 C9orf43Q8TAL5 461 aaPredicted RBP20.35■□□□□ 0.85
SIX3-201ENST00000260653 GPR119Q8TDV5 335 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 LGALS12Q96DT0 336 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 RNFT2Q96EX2 444 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 MOGAT1Q96PD6 335 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 OR5M11Q96RB7 305 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 DCUN1D5Q9BTE7 237 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 TAPBPLQ9BX59 468 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 CLEC2DQ9UHP7 191 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 CDC40O60508 579 aaKnown RBP eCLIP20.34■□□□□ 0.85
SIX3-201ENST00000260653 FBXO45P0C2W1 286 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 TGM1P22735 817 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 MTNR1AP48039 350 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 DOC2BQ14184 412 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 PLBD1Q6P4A8 553 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 CXXC5Q7LFL8 322 aaKnown RBP20.34■□□□□ 0.85
SIX3-201ENST00000260653 NUP54Q7Z3B4 507 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 PIP4P1Q86T03 277 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 MISPQ8IVT2 679 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 RNF138Q8WVD3 245 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 TTC9Q92623 222 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 KTI12Q96EK9 354 aaPredicted RBP20.34■□□□□ 0.85
SIX3-201ENST00000260653 MED20Q9H944 212 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 ZNF160Q9HCG1 818 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 CMC2Q9NRP2 79 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 FAM86C1Q9NVL1 165 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 ZNF337Q9Y3M9 751 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 SNTNA6NMZ2 147 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 MCIDASD6RGH6 385 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 GP1BBP13224 206 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 SLC6A6P31641 620 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 LIPAP38571 399 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 ZNF74Q16587 644 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 ANKRD13BQ86YJ7 626 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 C10orf53Q8N6V4 93 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 SNRNP27Q8WVK2 155 aaKnown RBP20.34■□□□□ 0.85
SIX3-201ENST00000260653 C12orf10Q9HB07 376 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 KLRF1Q9NZS2 232 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 PCDHGA3Q9Y5H0 932 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 HRH3Q9Y5N1 445 aa20.34■□□□□ 0.85
SIX3-201ENST00000260653 NSG1A0A0A6YYJ2 146 aa20.33■□□□□ 0.85
SIX3-201ENST00000260653 A0A1W2PPW3 197 aa20.33■□□□□ 0.85
SIX3-201ENST00000260653 ITGA10O75578 1167 aa20.33■□□□□ 0.85
SIX3-201ENST00000260653 NDUFB2O95178 105 aa20.33■□□□□ 0.85
SIX3-201ENST00000260653 TGFBR2P37173 567 aa20.33■□□□□ 0.85
SIX3-201ENST00000260653 NXNL2Q5VZ03 156 aa20.33■□□□□ 0.85
SIX3-201ENST00000260653 SHFQ7M4L6 423 aa20.33■□□□□ 0.85
SIX3-201ENST00000260653 ERI1Q8IV48 349 aaKnown RBP20.33■□□□□ 0.85
SIX3-201ENST00000260653 ALDH16A1Q8IZ83 802 aa20.33■□□□□ 0.85
SIX3-201ENST00000260653 HCAR1Q9BXC0 346 aa20.33■□□□□ 0.85
SIX3-201ENST00000260653 MMP25Q9NPA2 562 aa20.33■□□□□ 0.85
SIX3-201ENST00000260653 RABL2BQ9UNT1 228 aa20.33■□□□□ 0.85
SIX3-201ENST00000260653 DKK1O94907 266 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 CXCR1P25024 350 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 OTX2P32243 289 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 SOX3P41225 446 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 RPS4XP62701 263 aaKnown RBP20.33■□□□□ 0.84
SIX3-201ENST00000260653 C17orf67Q0P5P2 114 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 ZNF362Q5T0B9 420 aaPredicted RBP20.33■□□□□ 0.84
SIX3-201ENST00000260653 PAQR6Q6TCH4 344 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 NDUFAF7Q7L592 441 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 PPP1R32Q7Z5V6 425 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 M1APQ8TC57 530 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 RFKQ969G6 155 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 SPACA9Q96E40 222 aaPredicted RBP20.33■□□□□ 0.84
SIX3-201ENST00000260653 DNAJA3Q96EY1 480 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 TAS2R10Q9NYW0 307 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 DIMT1Q9UNQ2 313 aaKnown RBP20.33■□□□□ 0.84
SIX3-201ENST00000260653 MUC6Q6W4X9 2439 aa20.33■□□□□ 0.84
SIX3-201ENST00000260653 NOS3P29474 1203 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 EIF3IQ13347 325 aaKnown RBP20.32■□□□□ 0.84
SIX3-201ENST00000260653 MED22Q15528 200 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 CTF1Q16619 201 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 NTRK2Q16620 822 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 P2RY8Q86VZ1 359 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 NACC2Q96BF6 587 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 CRELD1Q96HD1 420 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 MRPS18AQ9NVS2 196 aaKnown RBP20.32■□□□□ 0.84
SIX3-201ENST00000260653 TRIM64BA6NI03 449 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 RAB36O95755 333 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 IGF2P01344 180 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 CD63P08962 238 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 HSMCR30P0CW71 290 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 CD36P16671 472 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 RAB40BQ12829 278 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 KLHL22Q53GT1 634 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 ERMAPQ96PL5 475 aaPredicted RBP20.32■□□□□ 0.84
SIX3-201ENST00000260653 FN3KQ9H479 309 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 NANSQ9NR45 359 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 MED11Q9P086 117 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 ADAM18Q9Y3Q7 739 aa20.32■□□□□ 0.84
SIX3-201ENST00000260653 PEPDP12955 493 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 PTGDSP41222 190 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 RPS5P46782 204 aaKnown RBP20.31■□□□□ 0.84
SIX3-201ENST00000260653 LTBQ06643 244 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms