RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 FBXW4P57775 412 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 TMEM201Q5SNT2 666 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 OR6V1Q8N148 313 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 TTLQ8NG68 377 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 TOE1Q96GM8 510 aaKnown RBP11.43□□□□□ -0.58
USP30-201ENST00000257548 AMDHD1Q96NU7 426 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 A4GALTQ9NPC4 353 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 ATG4BQ9Y4P1 393 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 DUXAA6NLW8 204 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 ACOT7O00154 380 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 CDC123O75794 336 aaPredicted RBP11.43□□□□□ -0.58
USP30-201ENST00000257548 CCKBRP32239 447 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 GNALP38405 381 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 CDK5Q00535 292 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 FOXK2Q01167 660 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 FLI1Q01543 452 aaPredicted RBP11.43□□□□□ -0.58
USP30-201ENST00000257548 RHOUQ7L0Q8 258 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 DGLUCYQ7Z3D6 616 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 GPAT4Q86UL3 456 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 TPRA1Q86W33 373 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 TRAM1L1Q8N609 369 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 ZNF511Q8NB15 262 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 CCDC107Q8WV48 283 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 HERVK_113Q902F9 699 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 FBXO17Q96EF6 278 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 C1QTNF2Q9BXJ5 285 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 ABRACLQ9P1F3 81 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 CBLCQ9ULV8 474 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 SIP14410 1827 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 CEP290O15078 2479 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 A0A0B4J2A0 478 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 CYB5AP00167 134 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 SBK2P0C263 348 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 PRPH2P23942 346 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 CDK2P24941 298 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 SIRPAP78324 504 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 PRKCZQ05513 592 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 PDZK1IP1Q13113 114 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 CBFBQ13951 182 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 EIF2B1Q14232 305 aaKnown RBP11.43□□□□□ -0.58
USP30-201ENST00000257548 MORN1Q5T089 497 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 FAM83HQ6ZRV2 1179 aaPredicted RBP11.43□□□□□ -0.58
USP30-201ENST00000257548 DPPA4Q7L190 304 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 NR2C2APQ86WQ0 139 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 DCUN1D3Q8IWE4 304 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 LINC00518Q8N0U6 118 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 SVBPQ8N300 66 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 OR4E2Q8NGC2 313 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 OR51D1Q8NGF3 324 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 IL36AQ9UHA7 158 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 SHPKQ9UHJ6 478 aa11.43□□□□□ -0.58
USP30-201ENST00000257548 SF3B6Q9Y3B4 125 aaKnown RBP11.43□□□□□ -0.58
USP30-201ENST00000257548 TBC1D3DA0A087WVF3 549 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 TBC1D3IA0A087WXS9 549 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 TBC1D3EA0A087X179 549 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 TBC1D3KA0A087X1G2 549 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 RPS10-NUDT3A0A1W2PQS6 291 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 TBC1D3FA6NER0 549 aaPredicted RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 TBC1D3LB9A6J9 549 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 LEFTY2O00292 366 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 KCNAB3O43448 404 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 TBC1D3HP0C7X1 549 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 SULT1A3P0DMM9 295 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 SULT1A4P0DMN0 295 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 TFPIP10646 304 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 EPCAMP16422 314 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 MAP3K8P41279 467 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 CBX5P45973 191 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 KCNJ3P48549 501 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 RAB5BP61020 215 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 GUCA2AQ02747 115 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 CDNFQ49AH0 187 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 TBC1D3GQ6DHY5 549 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 TBC1D3CQ6IPX1 549 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 SEZ6L2Q6UXD5 910 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 ZNF620Q6ZNG0 422 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 RAB11FIP2Q7L804 512 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 TBC1D3Q8IZP1 549 aaPredicted RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 ACOT4Q8N9L9 421 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 BPIFCQ8NFQ6 507 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 CD300LFQ8TDQ1 290 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 SOCS4Q8WXH5 440 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 CNN2Q99439 309 aaKnown RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 CMKLR1Q99788 373 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 COMMD4Q9H0A8 199 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 ZMAT5Q9UDW3 170 aaKnown RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 KIAA0100Q14667 2235 aaKnown RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 A8MVJ9 347 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 EMC8O43402 210 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 RAB3DO95716 219 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 DRD2P14416 443 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 IFNGR1P15260 489 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 CD34P28906 385 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 GABRA3P34903 492 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 PUS10Q3MIT2 529 aaKnown RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 COMTD1Q86VU5 262 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 FAM219AQ8IW50 185 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 S100PBPQ96BU1 408 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 ZNF75AQ96N20 296 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 ZNF578Q96N58 590 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms