RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 KLHL17Q6TDP4 642 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 TMEM108Q6UXF1 575 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 ZNF621Q6ZSS3 439 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 HMGN2P46Q86SG4 172 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 GOLGA6L1Q8N7Z2 621 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 ANKFN1Q8N957 763 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 CNOT9Q92600 299 aaKnown RBP18.57■□□□□ 0.56
NEDD8-201ENST00000250495 DDIT4LQ96D03 193 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 TEX37Q96LM6 180 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 OR52E6Q96RD3 313 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 ZBTB18Q99592 522 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 NAA11Q9BSU3 229 aaPredicted RBP18.57■□□□□ 0.56
NEDD8-201ENST00000250495 OR11A1Q9GZK7 315 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 BARX1Q9HBU1 254 aaPredicted RBP18.57■□□□□ 0.56
NEDD8-201ENST00000250495 PARPBPQ9NWS1 579 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 TAS2R16Q9NYV7 291 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 NPAP1Q9NZP6 1156 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 TMED7-TICAM2A0A0A6YYA0 188 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 GOLGA8QA0A0J9YX86 632 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 GOLGA8OA6NCC3 632 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 AGAP5A6NIR3 686 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 GOLGA8NF8WBI6 632 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 ZNF208O43345 1280 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 RAD51DO75771 328 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 CD8AP01732 235 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 PGRP06401 933 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 ALDOCP09972 364 aaKnown RBP18.56■□□□□ 0.56
NEDD8-201ENST00000250495 UQCRBP14927 111 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 IL7RP16871 459 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 PTAFRP25105 342 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 POLR2HP52434 150 aaKnown RBP18.56■□□□□ 0.56
NEDD8-201ENST00000250495 CDH11P55287 796 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 H3F3AP84243 136 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 HHATQ5VTY9 493 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 AGAP6Q5VW22 663 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 OR7E24Q6IFN5 339 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 DTX2Q86UW9 622 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 CCDC103Q8IW40 242 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 DNAJA3Q96EY1 480 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 HS6ST2Q96MM7 605 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 SLC38A1Q9H2H9 487 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 AIG1Q9NVV5 245 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 PRDM4Q9UKN5 801 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 TMED7Q9Y3B3 224 aa18.56■□□□□ 0.56
NEDD8-201ENST00000250495 FAAHO00519 579 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 SDHDO14521 159 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 ADAM11O75078 769 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 KRT75O95678 551 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 THBS1P07996 1170 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 NR2F1P10589 423 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 ACVR1BP36896 505 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 SLC1A3P43003 542 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 PLAURQ03405 335 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 DEPDC4Q8N2C3 294 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 PIAS4Q8N2W9 510 aaPredicted RBP18.55■□□□□ 0.56
NEDD8-201ENST00000250495 GLB1L3Q8NCI6 653 aaPredicted RBP18.55■□□□□ 0.56
NEDD8-201ENST00000250495 OR52N5Q8NH56 324 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 WDR60Q8WVS4 1066 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 MUS81Q96NY9 551 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 INPP5KQ9BT40 448 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 MALT1Q9UDY8 824 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 OSGIN1Q9UJX0 560 aa18.55■□□□□ 0.56
NEDD8-201ENST00000250495 CFAP73A6NFT4 308 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 TRPC5OSA6NMA1 111 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 KIAA1324LA8MWY0 1029 aaPredicted RBP18.54■□□□□ 0.56
NEDD8-201ENST00000250495 AP3D1O14617 1153 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 IGHV4-39P01824 125 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 C1QCP02747 245 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 TP53P04637 393 aaPredicted RBP18.54■□□□□ 0.56
NEDD8-201ENST00000250495 DBIP07108 87 aaKnown RBP18.54■□□□□ 0.56
NEDD8-201ENST00000250495 CHRM4P08173 479 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 TACR3P29371 465 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 IL12AP29459 219 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 NTF4P34130 210 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 NRF1Q16656 503 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 GSTA3Q16772 222 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 MAPK1IP1LQ8NDC0 245 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 THAP1Q9NVV9 213 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 UPB1Q9UBR1 384 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 POU2F3Q9UKI9 436 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 SLC9A8Q9Y2E8 581 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 GPR45Q9Y5Y3 372 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 SLC25A15Q9Y619 301 aa18.54■□□□□ 0.56
NEDD8-201ENST00000250495 HEATR1Q9H583 2144 aaKnown RBP18.53■□□□□ 0.56
NEDD8-201ENST00000250495 TMEM72A0PK05 275 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 HDAC3O15379 428 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 CRLF1O75462 422 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 GSNP06396 782 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 RPS4Y1P22090 263 aaKnown RBP18.53■□□□□ 0.56
NEDD8-201ENST00000250495 CDKN2CP42773 168 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 ZNF83P51522 516 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 DMTNQ08495 405 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 GABRA6Q16445 453 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 SLC22A25Q6T423 547 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 DNM1P46Q6ZS02 220 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 ALPK2Q86TB3 2170 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 PEX5LQ8IYB4 626 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 ZNF440Q8IYI8 595 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 ADAD1Q96M93 576 aaKnown RBP18.53■□□□□ 0.56
NEDD8-201ENST00000250495 B3GALT5Q9Y2C3 310 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms