RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 THBS1P07996 1170 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 VIPR2P41587 438 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 CCR6P51684 374 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 INHBCP55103 352 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 BAXQ07812 192 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 ILKQ13418 452 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 B3GLCTQ6Y288 498 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 TMUB2Q71RG4 321 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 MKXQ8IYA7 352 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 LMO3Q8TAP4 145 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 IL26Q9NPH9 171 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 OLAHQ9NV23 265 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 TRIM77I1YAP6 450 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 OR2C1O95371 312 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 FCER1GP30273 86 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 GRB2P62993 217 aaKnown RBP12.97□□□□□ -0.33
TARDBP-201ENST00000240185 OR7E24Q6IFN5 339 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 FAM185AQ8N0U4 392 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 SFXN2Q96NB2 322 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 SEC22CQ9BRL7 303 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 BOCQ9BWV1 1114 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 MCOLN1Q9GZU1 580 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-201ENST00000240185 ZFP92A6NM28 416 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 XRCC3O43542 346 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 SLC16A7O60669 478 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 HMGN2P05204 90 aaKnown RBP12.97□□□□□ -0.33
TARDBP-201ENST00000240185 SFTPDP35247 375 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 RACK1P63244 317 aaKnown RBP12.97□□□□□ -0.33
TARDBP-201ENST00000240185 GPR18Q14330 331 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 NSDHLQ15738 373 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 MOB1BQ7L9L4 216 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 S100A7AQ86SG5 101 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 OR9A2Q8NGT5 310 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 SCLYQ96I15 445 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 GAS2L1Q99501 681 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-201ENST00000240185 FAM173AQ9BQD7 235 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 TPPP3Q9BW30 176 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 PCDHGA1Q9Y5H4 931 aa12.97□□□□□ -0.33
TARDBP-201ENST00000240185 OR2T1O43869 369 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 PTHP01270 115 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 TEAD2Q15562 447 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 RPE65Q16518 533 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 C11orf91Q3C1V1 193 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 RETREG3Q86VR2 466 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 KCNRGQ8N5I3 272 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 TMEM217Q8N7C4 229 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 RAB3CQ96E17 227 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 PGAP3Q96FM1 320 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-201ENST00000240185 SLC39A13Q96H72 371 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 WDR92Q96MX6 357 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 SORBS1Q9BX66 1292 aaKnown RBP12.96□□□□□ -0.33
TARDBP-201ENST00000240185 SPHK1Q9NYA1 384 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 ASH2LQ9UBL3 628 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 SLC6A14Q9UN76 642 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 TMEM235A6NFC5 223 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 ANKRD30BLA7E2S9 258 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 PRDX3P30048 256 aaKnown RBP12.96□□□□□ -0.33
TARDBP-201ENST00000240185 IL2RGP31785 369 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 PSMB3P49720 205 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 OR2B8PP59922 312 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 ELOCQ15369 112 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 IAH1Q2TAA2 248 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-201ENST00000240185 AADACL3Q5VUY0 350 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 SFXN4Q6P4A7 337 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 CDS1Q92903 461 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 OR7D2Q96RA2 312 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 ELOVL3Q9HB03 270 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 KCMF1Q9P0J7 381 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 IGKV6D-41A0A0C4DH26 115 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 PRAMEF27A3QJZ7 478 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 OR5K4A6NMS3 321 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 JMJD7P0C870 316 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 ANXA7P20073 488 aaKnown RBP12.96□□□□□ -0.33
TARDBP-201ENST00000240185 DPP4P27487 766 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 XCR1P46094 333 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 NOGQ13253 232 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 PRAMEF9Q5VWM5 478 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 CD276Q5ZPR3 534 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 SLC46A3Q7Z3Q1 461 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 ANKRD9Q96BM1 317 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-201ENST00000240185 FAM122AQ96E09 287 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 HIPK2Q9H2X6 1198 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 FBXL4Q9UKA2 621 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 GPR45Q9Y5Y3 372 aa12.96□□□□□ -0.33
TARDBP-201ENST00000240185 METTL15A6NJ78 407 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 BET1O15155 118 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 TACR3P29371 465 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 POLR2IP36954 125 aaKnown RBP12.96□□□□□ -0.34
TARDBP-201ENST00000240185 F2RL1P55085 397 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 RPS21P63220 83 aaKnown RBP12.96□□□□□ -0.34
TARDBP-201ENST00000240185 FKBP1BP68106 108 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 LMAN2Q12907 356 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 LEXMQ3ZCV2 418 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 RNF212Q495C1 297 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 CLEC9AQ6UXN8 241 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 SSX7Q7RTT5 188 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 ZBTB44Q8NCP5 570 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 GPR26Q8NDV2 337 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 NECTIN4Q96NY8 510 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms