RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 OR6Q1Q8NGQ2 317 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF563Q8TA94 476 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF524Q96C55 264 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 SH3YL1Q96HL8 342 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 CTRCQ99895 268 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 HCAR1Q9BXC0 346 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 ARRDC1-AS1Q9H2J1 176 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 MMP27Q9H306 513 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 MMP25Q9NPA2 562 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 ERVK13-1Q9NX77 482 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 STUB1Q9UNE7 303 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 HIF3AQ9Y2N7 669 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 LOC100506127A0A0U1RQW1 187 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 METTL15A6NJ78 407 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 TMEM200CA6NKL6 621 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 APOL3O95236 402 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 KLK3P07288 261 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 TSPAN19P0C672 248 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 ASAH2BP0C7U1 165 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 AVPR2P30518 371 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 TGFBR1P36897 503 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 CRYBB2P43320 205 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 CBFBQ13951 182 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 OR2G6Q5TZ20 316 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 PRR23CQ6ZRP0 262 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 KLHL36Q8N4N3 616 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 ACBD7Q8N6N7 88 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 SIRT6Q8N6T7 355 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 LRRC17Q8N6Y2 441 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 S100ZQ8WXG8 99 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 TM9SF4Q92544 642 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 TTC9Q92623 222 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 HGDQ93099 445 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 RNF31Q96EP0 1072 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 ERMAPQ96PL5 475 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 TEAD3Q99594 435 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 SMOC1Q9H4F8 434 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 AKIP1Q9NQ31 210 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 SLC6A5Q9Y345 797 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 ASCC3Q8N3C0 2202 aaKnown RBP13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 TRBV11-1A0A0K0K1C0 115 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 MCIDASD6RGH6 385 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 IMPA2O14732 288 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 ZFAND5O76080 213 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 CCL4P13236 92 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF28P17035 718 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 NOS3P29474 1203 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 ATP6V1E1P36543 226 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 OPRL1P41146 370 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 SUMO3P55854 103 aaPredicted RBP13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 DLX5P56178 289 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 BDH1Q02338 343 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 POU4F2Q12837 409 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 FAM198BQ6UWH4 519 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 SHFQ7M4L6 423 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 LSRQ86X29 649 aaPredicted RBP13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 LRRC75AQ8NAA5 344 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 SECISBP2Q96T21 854 aaKnown RBP13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 DDOQ99489 341 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 SH3GL3Q99963 347 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 KLHDC3Q9BQ90 382 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 MESP1Q9BRJ9 268 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 MED20Q9H944 212 aa13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 CAB39Q9Y376 341 aaPredicted RBP13.04□□□□□ -0.32
RTFDC1-201ENST00000023939 CLDN25C9JDP6 229 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 LRRN3E7EW58 273 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 AGRPO00253 132 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 GP1BBP13224 206 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 UQCRC1P31930 480 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF846Q147U1 533 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF404Q494X3 552 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 SOWAHCQ53LP3 525 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 TCEAL6Q6IPX3 200 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF322Q6U7Q0 402 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 OR51G2Q8NGK0 314 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 B4GALNT2Q8NHY0 566 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 GPR119Q8TDV5 335 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 UFD1Q92890 307 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 TCEAL3Q969E4 200 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 TMCO6Q96DC7 493 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 WDR12Q9GZL7 423 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 NDEL1Q9GZM8 345 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 AKIRIN1Q9H9L7 192 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 FKRPQ9H9S5 495 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 HMG20AQ9NP66 347 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 NANSQ9NR45 359 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 GPN3Q9UHW5 284 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF229Q9UJW7 825 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 SSR3Q9UNL2 185 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 B3GNT3Q9Y2A9 372 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 SF3B6Q9Y3B4 125 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 IER3IP1Q9Y5U9 82 aa13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 SPIN1Q9Y657 262 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-201ENST00000023939 AKAP8O43823 692 aaKnown RBP13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF354AO60765 605 aaPredicted RBP13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 TXNDC12O95881 172 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 SBK2P0C263 348 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 GAAP10253 952 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 HIST1H1CP16403 213 aaKnown RBP13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 ITPKBP27987 946 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms