RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 EID3Q8N140 333 aa10.79□□□□□ -0.68
SYPL1-201ENST00000011473 CLEC18CQ8NCF0 446 aa10.79□□□□□ -0.68
SYPL1-201ENST00000011473 ELOA3Q8NG57 546 aa10.79□□□□□ -0.68
SYPL1-201ENST00000011473 PHF10Q8WUB8 498 aaKnown RBP10.79□□□□□ -0.68
SYPL1-201ENST00000011473 SLC25A43Q8WUT9 341 aaPredicted RBP10.79□□□□□ -0.68
SYPL1-201ENST00000011473 ITLN2Q8WWU7 325 aaPredicted RBP10.79□□□□□ -0.68
SYPL1-201ENST00000011473 SDCCAG3Q96C92 435 aa10.79□□□□□ -0.68
SYPL1-201ENST00000011473 NSMCE2Q96MF7 247 aa10.79□□□□□ -0.68
SYPL1-201ENST00000011473 RHCGQ9UBD6 479 aa10.79□□□□□ -0.68
SYPL1-201ENST00000011473 SLC7A7Q9UM01 511 aa10.79□□□□□ -0.68
SYPL1-201ENST00000011473 SPIN1Q9Y657 262 aaPredicted RBP10.79□□□□□ -0.68
SYPL1-201ENST00000011473 MBD3L4A6NDZ8 208 aaPredicted RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 MBD3L3A6NE82 208 aaPredicted RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 MBD3L5A6NJ08 208 aaPredicted RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 SULT2B1O00204 365 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 IL2RAP01589 272 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 IMPDH2P12268 514 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 ZNF239Q16600 458 aaKnown RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 DNAL1Q4LDG9 190 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 TMPPEQ6ZT21 453 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 LIX1LQ8IVB5 337 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 MBD3L2Q8NHZ7 208 aaPredicted RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 SSC4DQ8WTU2 575 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 ABHD3Q8WU67 409 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 DNAJA4Q8WW22 397 aaPredicted RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 DDIT4LQ96D03 193 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 CADM1Q9BY67 442 aaKnown RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 PRRG4Q9BZD6 226 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 CALHM2Q9HA72 323 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 RPS6KA6Q9UK32 745 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 IGKV1D-42A0A075B6H8 117 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 A1L4Q6 167 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 ZNF814B7Z6K7 855 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 hCG_2039718K7EN88 272 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 ZNF208O43345 1280 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 FMO6PO60774 539 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 DNAJC8O75937 253 aaPredicted RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 DIRAS1O95057 198 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 IFNW1P05000 195 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 HOXD4P09016 255 aaPredicted RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 FPR1P21462 350 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 BMP5P22003 454 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 CBLP22681 906 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 RPS5P46782 204 aaKnown RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 TAS2R41P59536 307 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 TRIM25Q14258 630 aaKnown RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 IFI44LQ53G44 452 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 TMEM211Q6ICI0 200 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 TSEN54Q7Z6J9 526 aaKnown RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 ARHGAP24Q8N264 748 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 GEMIN6Q8WXD5 167 aaKnown RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 SLC38A4Q969I6 547 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 KTI12Q96EK9 354 aaPredicted RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 UCK2Q9BZX2 261 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 SELENONQ9NZV5 590 aa10.78□□□□□ -0.68
SYPL1-201ENST00000011473 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 SAMD4AQ9UPU9 718 aaKnown RBP10.78□□□□□ -0.68
SYPL1-201ENST00000011473 MYO7BQ6PIF6 2116 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 A0A087WUJ7 227 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 WIPF3A6NGB9 483 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 A8MVM7 634 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 LRRN3E7EW58 273 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 KPNA4O00629 521 aaPredicted RBP10.77□□□□□ -0.69
SYPL1-201ENST00000011473 GSC2O15499 205 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 RAMP1O60894 148 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 TIMP3P35625 211 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 OR2B6P58173 313 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 RAC3P60763 192 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 VLDLRP98155 873 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 SF3B4Q15427 424 aaKnown RBP eCLIP10.77□□□□□ -0.69
SYPL1-201ENST00000011473 OR7A5Q15622 319 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 PDSS1Q5T2R2 415 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 C1orf140Q5VVS0 124 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 ZNF613Q6PF04 617 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 GDF7Q7Z4P5 450 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 DHFR2Q86XF0 187 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 NKAIN4Q8IVV8 208 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 CCDC103Q8IW40 242 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 WNT2BQ93097 391 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 CPNE4Q96A23 557 aaPredicted RBP10.77□□□□□ -0.69
SYPL1-201ENST00000011473 SLC47A1Q96FL8 570 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 SLC41A3Q96GZ6 507 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 RNF122Q9H9V4 155 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 COQ3Q9NZJ6 369 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 ACTR3BQ9P1U1 418 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 SEC14L4Q9UDX3 406 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 MCTS1Q9ULC4 181 aaKnown RBP10.77□□□□□ -0.69
SYPL1-201ENST00000011473 A4GNTQ9UNA3 340 aa10.77□□□□□ -0.69
SYPL1-201ENST00000011473 LRRK2Q5S007 2527 aa10.76□□□□□ -0.69
SYPL1-201ENST00000011473 TRAPPC13A5PLN9 417 aa10.76□□□□□ -0.69
SYPL1-201ENST00000011473 FAM90A27PA6NNH2 459 aa10.76□□□□□ -0.69
SYPL1-201ENST00000011473 FFAR1O14842 300 aa10.76□□□□□ -0.69
SYPL1-201ENST00000011473 SMAD9O15198 467 aaKnown RBP10.76□□□□□ -0.69
SYPL1-201ENST00000011473 CHP2O43745 196 aa10.76□□□□□ -0.69
SYPL1-201ENST00000011473 LYPD3O95274 346 aa10.76□□□□□ -0.69
SYPL1-201ENST00000011473 SYNGR4O95473 234 aa10.76□□□□□ -0.69
SYPL1-201ENST00000011473 MT-ND1P03886 318 aa10.76□□□□□ -0.69
SYPL1-201ENST00000011473 CEACAM8P31997 349 aaPredicted RBP10.76□□□□□ -0.69
SYPL1-201ENST00000011473 SIRPAP78324 504 aa10.76□□□□□ -0.69
SYPL1-201ENST00000011473 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms