RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Atp6ap1Q9R1Q9 463 aa11.52□□□□□ -0.56
Pcdh1-202ENSMUST00000159405 Srebf1Q9WTN3 1134 aa11.52□□□□□ -0.56
Pcdh1-202ENSMUST00000159405 Nup214Q80U93 2085 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 6430628N08RikA0A0U1RQ45 177 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Olfr1107A2AVB8 312 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Olfr571E9Q407 322 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Olfr605E9Q838 314 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Slc6a6O35316 621 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 TpbpaP13438 124 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Gpd1P13707 349 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Fbxo31Q3TQF0 507 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Zfp429Q7M6Y0 485 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Znf436Q8BPP0 452 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Olfr98Q8VFD9 309 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Clcc1Q99LI2 539 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 AspnQ99MQ4 373 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 4933400A11RikQ9CR52 288 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 1700029F12RikQ9CRB4 147 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Mrpl19Q9D338 292 aaKnown RBP11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 HaghlQ9DB32 283 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 SmpxQ9DC77 85 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Olfr887Q9EQA6 309 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Nox4Q9JHI8 578 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Slc22a21Q9WTN6 564 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 TinagQ9WUR0 475 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 RgrQ9Z2B3 291 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hist1h2abC0HKE1 130 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hist1h2acC0HKE2 130 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hist1h2adC0HKE3 130 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hist1h2aeC0HKE4 130 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hist1h2agC0HKE5 130 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hist1h2aiC0HKE6 130 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hist1h2anC0HKE7 130 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hist1h2aoC0HKE8 130 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hist1h2apC0HKE9 130 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Fam98cE9PYD1 344 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Zfp846G3X996 541 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 G530012D18RikJ3QK25 139 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Stxbp1O08599 594 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 P03987 398 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Sox7P40646 380 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Gdf7P43029 461 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 EvlP70429 414 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Pitx2P97474 317 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Garem1Q3UFT3 876 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Ndufb6Q3UIU2 128 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 XkrxQ5GH68 449 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 ParpbpQ6IRT3 573 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Kansl1Q80TG1 1036 aaKnown RBP11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Reps2Q80XA6 521 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Jazf1Q80ZQ5 243 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hist3h2aQ8BFU2 130 aaKnown RBP11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 E330021D16RikQ8BW45 371 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Ugt2a3Q8BWQ1 534 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Yipf4Q8C407 246 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hist1h2afQ8CGP5 130 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Commd1Q8K4M5 188 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Olfr683Q8VGV1 319 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Tmem216Q9CQC4 141 aa11.52□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Ly75Q60767 1723 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Auts2A0A087WPF7 1261 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Trbv23A0A0A6YWQ1 115 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Gm5788A0A1Y7VK80 144 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Dcpp2E9PYC2 171 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Gpr137cE9Q343 423 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Olfr152G3X9L8 316 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Dcpp1L7N1X9 171 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Hax1O35387 280 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Fcn2O70497 314 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Mapkapk2P49138 386 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Lypd4Q8BVP6 246 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Rad51ap1Q8C551 337 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Kcnmb1Q8CAE3 191 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Cops8Q8VBV7 209 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Thap7Q8VCZ3 309 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Olfr1226Q8VGM5 310 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Otud1Q9CUB6 454 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Ttc9bQ9D6E4 239 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Erp27Q9D8U3 272 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Fam13cQ9DBR2 601 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Vmn1r48Q9EQ52 302 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Slco1a1Q9QXZ6 670 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Fer1l6E0CZ42 1862 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Gm2022A0A1Y7VLT7 144 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Zfp69A2A761 587 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Gm5415E9PXF3 478 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Gm21411J3KMS0 136 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Olfr1249L7MU51 318 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Psmd4O35226 376 aaKnown RBP11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Fcn1O70165 334 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Lin7bO88951 207 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Igsf6P0C6B7 237 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 NdnP25233 325 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Olfr6P34986 316 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Ephb3P54754 993 aaKnown RBP11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 McptlQ00356 246 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Scrn3Q3TMH2 418 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Fam189a2Q4FZH1 290 aa11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 TpppQ7TQD2 218 aaKnown RBP11.51□□□□□ -0.57
Pcdh1-202ENSMUST00000159405 Olfr855Q7TRF8 312 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms