RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tnfrsf1bP25119 474 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 SnnP61807 88 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Pou2f2Q00196 463 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm5662Q8BX20 144 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Hnf4gQ9WUU6 408 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 4930402F06RikA2AUQ8 332 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Prl8a2O54832 240 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 P20040 264 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Bod1Q5SQY2 173 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Peli2Q8BST6 419 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rrnad1Q8BZG5 475 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn1r220Q8R272 298 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn1r42Q8VBS7 329 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Alg2Q9DBE8 415 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Trav15d-1-dv6d-1A0A075B624 124 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Il1r2P27931 410 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Ptpn6P29351 595 aaKnown RBP11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 StarP51557 284 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Smim15Q3UTD9 74 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1162Q7TR28 314 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm10600Q8BQ57 223 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Poglut1Q8BYB9 392 aaKnown RBP11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 1700020N01RikQ8CF20 87 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Crtac1Q8R555 646 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr729Q8VET4 323 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Desi1Q9CQT7 168 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Kcnmb4Q9JIN6 210 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Kcnk7Q9Z2T1 307 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm16368A0A1Y7VNG9 144 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zfp937A2ANU7 503 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tcn2O88968 430 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Amy1P00687 511 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tk1P04184 233 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 LckP06240 509 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Il1bP10749 269 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Prf1P10820 554 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 MaoaQ64133 526 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Heatr6Q6P1G0 1184 aaKnown RBP11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cldn34b3Q80ZS5 209 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Pramef8Q8CE24 480 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rab43Q8CG50 210 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Nectin1Q9JKF6 515 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 ArafP04627 604 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Alox5apP30355 161 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 PfkmP47857 780 aaKnown RBP11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 MocosQ14CH1 862 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Mep1bQ61847 704 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Grm7Q68ED2 915 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rab39bQ8BHC1 213 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Hoxc12Q8K5B8 280 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rab40bQ8VHP8 278 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Exosc7Q9D0M0 291 aaKnown RBP11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 BC034090A0A087WP46 1202 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn2r106E9PY92 862 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 HbzP06467 142 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Slc37a3Q3TIT8 494 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Apcdd1Q3U128 514 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zswim1Q9CWV7 455 aaKnown RBP11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gpr88Q9EPB7 384 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 TrehQ9JLT2 576 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cpxm1Q9Z100 722 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Fkbp1bQ9Z2I2 108 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rarres1F6ZIS7 283 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Foxred1Q3TQB2 487 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Chst2Q80WV3 530 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Lyrm4Q8K215 91 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr459Q924H8 314 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zbtb8aQ9CWH1 434 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1436A0PK57 315 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Nxt2Q3UNA4 142 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 B3gnt6Q3USF0 391 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Map6Q7TSJ2 906 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Hcar1Q8C131 343 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Fam155aQ8CCS2 467 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Prelid1Q8R107 217 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tspan33Q8R3S2 283 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 PurgQ8R4E6 350 aaKnown RBP11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rwdd3Q8VIL2 267 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Extl1Q9JKV7 669 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm2075J3QMW5 144 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 CfhP06909 1234 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gstm2P15626 218 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Ifna15Q61718 190 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Prmt8Q6PAK3 394 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Frs2Q8C180 508 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Agbl3Q8CDP0 1006 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cd276Q8VE98 316 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Arpc5Q9CPW4 151 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Robo3Q9Z2I4 1366 aa11.25□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1432A0A140LHS7 346 aa11.24□□□□□ -0.61
Trim56-201ENSMUST00000054384 Galr1P56479 348 aa11.24□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vgll2Q8BGW8 322 aa11.24□□□□□ -0.61
Trim56-201ENSMUST00000054384 Nmnat2Q8BNJ3 307 aa11.24□□□□□ -0.61
Trim56-201ENSMUST00000054384 Sf3b4Q8QZY9 424 aaKnown RBP11.24□□□□□ -0.61
Trim56-201ENSMUST00000054384 Recql5Q8VID5 982 aa11.24□□□□□ -0.61
Trim56-201ENSMUST00000054384 Topaz1E5FYH1 1653 aa11.24□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr430E9Q5F1 317 aa11.24□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn2r8L7N472 848 aa11.24□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gjd2O54851 321 aa11.24□□□□□ -0.61
Trim56-201ENSMUST00000054384 PahP16331 453 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms