RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Spata19Q9DAQ9 154 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 ChmlQ9QZD5 621 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Parp4E9PYK3 1969 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gm7145A0A087WS64 360 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Ighv15-2A0A0A6YX72 118 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Chrna10B2RX82 447 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Zfp760E9QAF5 666 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Vmn1r27K7N688 303 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Vmn1r16K7N775 303 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gstm3P19639 218 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Khdc4Q3TCX3 612 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Tmem247Q497K7 211 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Galk2Q68FH4 458 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Ckmt2Q6P8J7 419 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Smarcd3Q6P9Z1 483 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gpbar1Q80SS6 329 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Slitrk5Q810B7 957 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Lrrtm2Q8BGA3 515 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Wdr48Q8BH57 676 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Plac9Q8K262 108 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr572Q8VGZ3 318 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 TardbpQ921F2 414 aaKnown RBP7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Q99K99 313 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Lyrm1Q9CQB7 122 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Adad2Q9D5P4 478 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Nmrk2Q9D7C9 195 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Vmn1r53Q9EP93 310 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Izumo1rQ9EQF4 244 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 P2rx4Q9JJX6 388 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr71Q9QZ18 312 aa7.99□□□□□ -1.13
Trim39-201ENSMUST00000042717 Sult2a7A0A1B0GRF0 313 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 PvrigA0A1B0GS01 234 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Hcn1O88704 910 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 F10O88947 481 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 ChrndP02716 520 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 LynP25911 512 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 CckbrP56481 453 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cdc42P60766 191 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Nrsn1P97799 196 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Zdhhc11Q14AK4 347 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Ttyh2Q3TH73 532 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Wfdc6aQ3UW55 136 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Nr0b1Q61066 472 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 BocQ6AZB0 1110 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Fam117aQ7TNF9 451 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Acaa2Q8BWT1 397 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 PxkQ8BX57 582 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 H1fntQ8CJI4 398 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Slc31a1Q8K211 196 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Hyal3Q8VEI3 412 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Klf7Q99JB0 301 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Slc10a6Q9CXB2 373 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Pole3Q9JKP7 145 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Spo11Q9WTK8 396 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gm36864A0A1Y7VJE6 447 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Zfp978A2A7I1 335 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Ttll3A4Q9E5 927 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Pdzd8B9EJ80 1147 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr31E9Q3K2 317 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gm10639E9Q6L7 222 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr66F8VQ01 311 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Esp36G3UZD8 160 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Hmgn1P18608 96 aaKnown RBP7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 LipcP27656 510 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr6P34986 316 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 AcadsQ07417 412 aaKnown RBP7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Obox3Q3UT54 335 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Spag8Q3V0Q6 470 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Dcdc2Q5DU00 475 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Taar6Q5QD13 345 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 BC080695Q66JY9 481 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr728Q7TRM6 311 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Slc35f1Q8BGK5 408 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Ebf4Q8K4J2 599 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Mmd2Q8R189 247 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Wwtr1Q9EPK5 395 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cyp11a1Q9QZ82 526 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Efemp2Q9WVJ9 443 aa7.98□□□□□ -1.13
Trim39-201ENSMUST00000042717 Macc1E9PXX8 851 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gm20518E9Q548 580 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr608E9Q564 316 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 2610001J05RikF2Z3Y9 59 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Nmur1O55040 428 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 FiglaO55208 194 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 IlkO55222 452 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cd79aP11911 220 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Ms4a15Q3UPL6 245 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Tspan7Q62283 249 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Eid2Q6X7S9 236 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cpeb4Q7TN98 729 aaKnown RBP7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Clic5Q8BXK9 251 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Apoa5Q8C7G5 368 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 D2hgdhQ8CIM3 535 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 MepeQ8K4L6 441 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Mmgt2Q8R3L0 123 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr1008Q8VGC7 313 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Slc25a30Q9CR58 291 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Med31Q9CXU1 131 aaKnown RBP7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Pgm3Q9CYR6 542 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Srfbp1Q9CZ91 441 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms