RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Cd101A8E0Y8 1033 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr655E9Q252 308 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Pcbp3P57722 371 aaKnown RBP10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Vat1Q62465 406 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 C1qtnf6Q6IR41 264 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Lrit2Q6PFC5 549 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Ffar1Q76JU9 300 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr1065Q7TR70 313 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Trmt61aQ80XC2 290 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Znf750Q8BH05 703 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Aspscr1Q8VBT9 550 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Eps8l3Q91WL0 600 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Tmem218Q9CQ44 115 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Pop7Q9DCH2 140 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Taf8Q9EQH4 308 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 RhcgQ9QXP0 498 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Coro1bQ9WUM3 484 aaKnown RBP10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr1025-ps1A0A140T8K3 312 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr190K7N5T5 307 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Lsm2O35900 95 aaKnown RBP10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 AcheP21836 614 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Snai2P97469 269 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Defb43Q30KM9 69 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 C130050O18RikQ497Y9 356 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Slc6a5Q761V0 799 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Atg4bQ8BGE6 393 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Mat1aQ91X83 396 aaKnown RBP10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Tspan1Q99J59 240 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr971Q9EQ96 307 aa10.57□□□□□ -0.72
Topbp1-201ENSMUST00000035164 L3mbtl4B1B1A0 621 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Sult6b2B7ZWN4 290 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Zfp871G5E905 615 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Fzd1O70421 642 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Amd1P0DMN7 334 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Tas2r123P59528 333 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Plpp4Q0VBU9 271 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 P4ha3Q6W3F0 542 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Rab43Q8CG50 210 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr633Q8VF02 312 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr689Q8VG18 320 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Pycr1Q922W5 309 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Ier3ip1Q9CR20 82 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Yipf7Q9JIM5 254 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Adam28Q9JLN6 793 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Foxe3Q9QY14 288 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Sfrp5Q9WU66 314 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 A26c2A0A140LHE4 291 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm14085A2AWR5 660 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 NgpO08692 167 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 PhyhO35386 338 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Fcn2O70497 314 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Cfl1P18760 166 aaKnown RBP10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Slc30a10Q3UVU3 470 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Fbxw16Q497Z0 464 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 PdgfrlQ6PE55 375 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Tas2r143Q7TQB9 293 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Rxfp3Q8BGE9 472 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Q8C4X7 151 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Lamtor1Q9CQ22 161 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Copz2Q9JHH9 205 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 ShhQ62226 437 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr765Q7TRI6 309 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Scml4Q80VG1 408 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Vrk1Q80X41 440 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Agfg1Q8K2K6 561 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Vmn1r87Q8R255 295 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 LgalslQ8VED9 172 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr767Q8VG33 309 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr651Q8VG78 313 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gid4Q9CPY6 217 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Mrto4Q9D0I8 239 aaKnown RBP10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr550E9Q544 316 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 OtpO09113 325 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Yme1l1O88967 715 aaKnown RBP10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 NfyaP23708 346 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Klkb1P26262 638 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Adamts15P59384 950 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 HpQ61646 347 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Vamp1Q62442 118 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 PianpQ6P1B3 278 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Eci3Q78JN3 317 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Skida1Q80YR3 822 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Npsr1Q8BZP8 371 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Duoxa1Q8VE49 341 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr993Q8VF75 314 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 ClpsQ9CQC2 113 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Klhl1Q9JI74 751 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Adamdec1Q9R0X2 467 aa10.56□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm44973A0A140LJJ1 189 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Vmn2r108E9PYS0 855 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr574F8VQ18 346 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 BC117090L7N257 96 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Zp3P10761 424 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Fxyd2Q04646 70 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Lhfpl5Q4KL25 219 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Taar7dQ5QD10 358 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Timmdc1Q8BUY5 285 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Slc25a21Q8BZ09 298 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Cml2Q8CHQ9 238 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Lipt1Q8VCM4 373 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms