RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Dusp5Q1HL35 384 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Epha6Q62413 1035 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Zar1Q80SU3 361 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Inpp5kQ8C5L6 468 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Cdt1Q8R4E9 557 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 NansQ99J77 359 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Dhrs1Q99L04 313 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Tcam1Q99NB3 548 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Zbtb8aQ9CWH1 434 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Ca7Q9ERQ8 264 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Mmp19Q9JHI0 527 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc7a7Q9Z1K8 510 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 PatjQ63ZW7 1834 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm21854A0A087WNM4 232 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Omt2aF6ZJR3 104 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Phb2O35129 299 aaKnown RBP9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 PipP02816 146 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Tcea1P10711 301 aaKnown RBP9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gstm3P19639 218 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Opn1swP51491 346 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 HnrnpkP61979 463 aaKnown RBP9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Dvl3Q61062 716 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Znf235Q61116 645 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Sema3bQ62177 748 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Klhl9Q6ZPT1 617 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc30a8Q8BGG0 367 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Clec9aQ8BRU4 238 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Rnf26Q8BUH7 424 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 FntbQ8K2I1 437 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr353Q8VGK0 311 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Cd209dQ91ZW8 237 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Sfxn2Q925N2 322 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Clint1Q99KN9 631 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Chp2Q9D869 196 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 C1qtnf2Q9D8U4 294 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr44Q9EQB8 314 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Cts6Q9ET52 334 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Zfp442A2AQA0 667 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 E9Q0B3 247 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm3727J3QM54 205 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm8888J3QPX5 126 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Kcnk4O88454 398 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 P01669 111 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 P01670 111 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 P01671 111 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 P01672 111 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Ptpn22P29352 802 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Etv2P41163 335 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 StsP50427 624 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc1a3P56564 543 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Map3k8Q07174 467 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Prr27Q3SYJ2 352 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Uap1l1Q3TW96 507 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gls2Q571F8 602 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Dag1Q62165 893 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 IfnkQ7TSL0 199 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 H1fntQ8CJI4 398 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr53Q8VGL8 312 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Asb18Q8VHA6 467 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Mrps18bQ99N84 254 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Yif1bQ9CX30 311 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Spns3Q9D232 514 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Rp2Q9EPK2 347 aa9.31□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr1315-ps1A0A140LI66 314 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm13420A0A140LJJ2 248 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm14692A2BH01 229 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Prr22F6TNE3 422 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Vmn1r168K7N6B6 309 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Dnajb3O35723 242 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 P01648 108 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 H2-Q10P01898 325 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Atxn1P54254 791 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 March9Q3TZ87 348 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr1316Q8VG12 314 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr447Q8VGP6 310 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr649Q8VGW1 312 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Pno1Q9CPS7 248 aaKnown RBP9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Mrpl21Q9D1N9 209 aaKnown RBP9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Sult1b1Q9QWG7 299 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Ate1Q9Z2A5 516 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm8797A0A0A6YW67 77 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 4930433I11RikA0A0U1RPT6 723 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Klhl15A2AAX3 604 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Vmn2r91E9Q2U5 856 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Cldn34aG3UW52 211 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Smad6O35182 495 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Zfp1P08042 402 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 UbbP0CG49 305 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 UbcP0CG50 734 aaKnown RBP9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Htr2aP35363 471 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Rps27aP62983 156 aaKnown RBP9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Uba52P62984 128 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 UbdP63072 162 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Nkx3-2P97503 333 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 PrtgQ2EY15 1191 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Tgoln1Q62313 353 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 InavaQ7TN12 663 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Znf516Q7TSH3 1157 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Q80Y39 304 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 PcgF3Q8BTQ0 241 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms