RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ACAD8Q9UKU7 415 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 MED31Q9Y3C7 131 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 ORC6Q9Y5N6 252 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 OR2M5A3KFT3 312 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 C7orf72A4D263 438 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 A8MVM7 634 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 PYCARD-AS1I3L0S3 204 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 J3KTA2 159 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 KPNA4O00629 521 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-218ENST00000641491 SEC14L5O43304 696 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 OR10H3O60404 316 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 CCNB2O95067 398 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 EPPINO95925 133 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 ACTL6AO96019 429 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 HIST1H2ABP04908 130 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 RFPL3SP0C7P2 107 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 ABOP16442 354 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 ZNF23P17027 643 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 CHMP24386 653 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 HTR2AP28223 471 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 DNAJA1P31689 397 aaKnown RBP11.73□□□□□ -0.53
PHGDH-218ENST00000641491 SFTPDP35247 375 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 MAGEA2P43356 314 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 CSNK2A1P68400 391 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-218ENST00000641491 IL1RL1Q01638 556 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 RCN1Q15293 331 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 TOMM34Q15785 309 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-218ENST00000641491 SGCBQ16585 318 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 HIST3H2AQ7L7L0 130 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 COMTD1Q86VU5 262 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 PM20D2Q8IYS1 436 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 UBQLNLQ8IYU4 475 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 CPAMD8Q8IZJ3 1885 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 LILRA2Q8N149 483 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 ICA1LQ8NDH6 482 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 OR4D11Q8NGI4 311 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 OR5M1Q8NGP8 315 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 TMEM239Q8WW34 195 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 HIST1H2ACQ93077 130 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 SLC6A15Q9H2J7 730 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 VCX3BQ9H321 246 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 UBQLN3Q9H347 655 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 TMEM185BQ9H7F4 350 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 DCLRE1BQ9H816 532 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 NMNAT1Q9HAN9 279 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-218ENST00000641491 OSGIN1Q9UJX0 560 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 TMEM5Q9Y2B1 443 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 NTNG1Q9Y2I2 539 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 CHST2Q9Y4C5 530 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 AP4B1Q9Y6B7 739 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 U3KQV3 271 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 UNC79Q9P2D8 2635 aa11.73□□□□□ -0.53
PHGDH-218ENST00000641491 A0A1W2PRQ8 180 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 SHISA8B8ZZ34 492 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 EIF1AYO14602 144 aaKnown RBP11.72□□□□□ -0.53
PHGDH-218ENST00000641491 ZNF208O43345 1280 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 OR2T1O43869 369 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 SYNGR4O95473 234 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 SEMG1P04279 462 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 SAGP10523 405 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-218ENST00000641491 IDUAP35475 653 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 UGT2B15P54855 530 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 RAC1P63000 192 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 CRYZQ08257 329 aaKnown RBP11.72□□□□□ -0.53
PHGDH-218ENST00000641491 DGCR6Q14129 220 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 MFSD13AQ14CX5 517 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 ATP6AP1Q15904 470 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 SYT14P1Q58G82 188 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 WLSQ5T9L3 541 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 HIPK1Q86Z02 1210 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 ZDHHC13Q8IUH4 622 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 PAPD5Q8NDF8 572 aaKnown RBP11.72□□□□□ -0.53
PHGDH-218ENST00000641491 NEIL3Q8TAT5 605 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 DUS3LQ96G46 650 aaKnown RBP11.72□□□□□ -0.53
PHGDH-218ENST00000641491 C7orf34Q96L11 122 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 KLHL15Q96M94 604 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 ALPK1Q96QP1 1244 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 OR5B2Q96R09 309 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 PRR14Q9BWN1 585 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 ASPNQ9BXN1 380 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 PRRG4Q9BZD6 226 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 SLC19A3Q9BZV2 496 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 ZDHHC11Q9H8X9 412 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 PAQR5Q9NXK6 330 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-218ENST00000641491 A4GNTQ9UNA3 340 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 CAMK2AQ9UQM7 478 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 SLC6A5Q9Y345 797 aa11.72□□□□□ -0.53
PHGDH-218ENST00000641491 TRAV36DV7A0A075B6V5 113 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 A0A087WUJ7 227 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 HTR3EA5X5Y0 456 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 BCKDKO14874 412 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 OR6A2O95222 327 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 FPR1P21462 350 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 CLK1P49759 484 aaKnown RBP11.71□□□□□ -0.53
PHGDH-218ENST00000641491 SRYQ05066 204 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 EXOC3L2Q2M3D2 409 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 TMEM176BQ3YBM2 270 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-218ENST00000641491 SLC25A53Q5H9E4 307 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 GFRALQ6UXV0 394 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 TRILQ7L0X0 811 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms