RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CFAP73A6NFT4 308 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 CLDN24A6NM45 220 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 GPR171O14626 319 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 POLR3GO15318 223 aaPredicted RBP16.83■□□□□ 0.28
CLN6-221ENST00000637494 CCNA2P20248 432 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 MAP2K6P52564 334 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 DSTNP60981 165 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 PDK3Q15120 406 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 LIN52Q52LA3 116 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 COX20Q5RI15 118 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 GOLGA6L1Q8N7Z2 621 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 OR52B2Q96RD2 323 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 POTEKPQ9BYX7 375 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 TPT1P8Q9HAU6 139 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 PRDM4Q9UKN5 801 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 ZNF232Q9UNY5 417 aa16.83■□□□□ 0.28
CLN6-221ENST00000637494 TMED7-TICAM2A0A0A6YYA0 188 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 FAM234BA2RU67 622 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 BCAS1O75363 584 aaPredicted RBP16.82■□□□□ 0.28
CLN6-221ENST00000637494 CNOT4O95628 575 aaKnown RBP16.82■□□□□ 0.28
CLN6-221ENST00000637494 LOXP28300 417 aaPredicted RBP16.82■□□□□ 0.28
CLN6-221ENST00000637494 OR2B6P58173 313 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 COPZ1P61923 177 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 LARS2Q15031 903 aaKnown RBP16.82■□□□□ 0.28
CLN6-221ENST00000637494 ZSWIM7Q19AV6 140 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 Q5PR19 223 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 MRPL2Q5T653 305 aaKnown RBP16.82■□□□□ 0.28
CLN6-221ENST00000637494 SSX8Q7RTT4 187 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 UBE2J2Q8N2K1 259 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 TMEM171Q8WVE6 324 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 DYDC1Q8WWB3 177 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 ZNF775Q96BV0 537 aaPredicted RBP16.82■□□□□ 0.28
CLN6-221ENST00000637494 MUCL1Q96DR8 90 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 C7orf26Q96N11 449 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 ZNF300Q96RE9 604 aaPredicted RBP16.82■□□□□ 0.28
CLN6-221ENST00000637494 NAA11Q9BSU3 229 aaPredicted RBP16.82■□□□□ 0.28
CLN6-221ENST00000637494 TMEM181Q9P2C4 612 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 TRAPPC4Q9Y296 219 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 NOSIPQ9Y314 301 aaKnown RBP16.82■□□□□ 0.28
CLN6-221ENST00000637494 TMED7Q9Y3B3 224 aa16.82■□□□□ 0.28
CLN6-221ENST00000637494 ABCA4P78363 2273 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 HEATR5AQ86XA9 2040 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 FAAHO00519 579 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 ZNF208O43345 1280 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 EIF1BO60739 113 aaKnown RBP16.81■□□□□ 0.28
CLN6-221ENST00000637494 TMCC2O75069 709 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 TGDSO95455 350 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 C1QCP02747 245 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 BCHEP06276 602 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 CD3EP07766 207 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 ETFAP13804 333 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 RPS4Y1P22090 263 aaKnown RBP16.81■□□□□ 0.28
CLN6-221ENST00000637494 ADSLP30566 484 aaPredicted RBP16.81■□□□□ 0.28
CLN6-221ENST00000637494 SLC1A3P43003 542 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 SLC35A1P78382 337 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 TSC22D1Q15714 1073 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 ABLIM2Q6H8Q1 611 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 ADGRG3Q86Y34 549 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 OR52P1PQ8NH57 321 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 C18orf12Q96KH6 178 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 CXorf56Q9H5V9 222 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 PRSS50Q9UI38 385 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 RNF115Q9Y4L5 304 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 ITPR3Q14573 2671 aa16.81■□□□□ 0.28
CLN6-221ENST00000637494 ZNF814B7Z6K7 855 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 AP3D1O14617 1153 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 HS3ST1O14792 307 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 LYZL6O75951 148 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 CXCR1P25024 350 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 TACR3P29371 465 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 EPS8Q12929 822 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 TAB1Q15750 504 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 STK11Q15831 433 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 EPGNQ6UW88 154 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 PRSS57Q6UWY2 283 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 MAVSQ7Z434 540 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 BIVMQ86UB2 503 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 ZNF611Q8N823 705 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 VPS33AQ96AX1 596 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 APH1AQ96BI3 265 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 PERPQ96FX8 193 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 ARL5BQ96KC2 179 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 ATP6V1G3Q96LB4 118 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 OR11A1Q9GZK7 315 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 TCF7L2Q9NQB0 619 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 DLL4Q9NR61 685 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 OSGIN1Q9UJX0 560 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 ING1Q9UK53 422 aaPredicted RBP16.8■□□□□ 0.28
CLN6-221ENST00000637494 IFT52Q9Y366 437 aa16.8■□□□□ 0.28
CLN6-221ENST00000637494 IGKV3D-15A0A087WSY6 115 aa16.79■□□□□ 0.28
CLN6-221ENST00000637494 A0A0G2JPF8 293 aa16.79■□□□□ 0.28
CLN6-221ENST00000637494 HNRNPCL2B2RXH8 293 aa16.79■□□□□ 0.28
CLN6-221ENST00000637494 HNRNPCL3B7ZW38 293 aa16.79■□□□□ 0.28
CLN6-221ENST00000637494 CLOCKO15516 846 aa16.79■□□□□ 0.28
CLN6-221ENST00000637494 HNRNPCL1O60812 293 aaKnown RBP16.79■□□□□ 0.28
CLN6-221ENST00000637494 MRPL33O75394 65 aaKnown RBP16.79■□□□□ 0.28
CLN6-221ENST00000637494 HNRNPCL4P0DMR1 293 aa16.79■□□□□ 0.28
CLN6-221ENST00000637494 GGT1P19440 569 aa16.79■□□□□ 0.28
CLN6-221ENST00000637494 NCF2P19878 526 aaPredicted RBP16.79■□□□□ 0.28
CLN6-221ENST00000637494 P2RY8Q86VZ1 359 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms