RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ATP6V1C2Q8NEY4 427 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 ADAMTS16Q8TE57 1224 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 SLC25A43Q8WUT9 341 aaPredicted RBP14.41□□□□□ -0.1
CLN6-216ENST00000636876 SLC47A1Q96FL8 570 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 PNPLA3Q9NST1 481 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 SELENONQ9NZV5 590 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 ENPP4Q9Y6X5 453 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 TMEM72A0PK05 275 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 ELOA3DA6NLF2 546 aaPredicted RBP14.4□□□□□ -0.1
CLN6-216ENST00000636876 PRRG2O14669 202 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 SEC14L5O43304 696 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 CIB2O75838 187 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 OR5F1O95221 314 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 LYPD3O95274 346 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 OPN1LWP04000 364 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 PNMTP11086 282 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 CCNA2P20248 432 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 GNLYP22749 145 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 FKBP2P26885 142 aaKnown RBP14.4□□□□□ -0.1
CLN6-216ENST00000636876 SFTPDP35247 375 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 MAP2K6P52564 334 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 SUCLG1P53597 346 aaKnown RBP14.4□□□□□ -0.1
CLN6-216ENST00000636876 CDH12P55289 794 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 CLDN15P56746 228 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 TAS2R41P59536 307 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 VLDLRP98155 873 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 SRYQ05066 204 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 ELOA3BQ3SY89 546 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 TMEM176BQ3YBM2 270 aaPredicted RBP14.4□□□□□ -0.1
CLN6-216ENST00000636876 SYT14P1Q58G82 188 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 TSEN54Q7Z6J9 526 aaKnown RBP14.4□□□□□ -0.1
CLN6-216ENST00000636876 ELOA3Q8NG57 546 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 SLC38A4Q969I6 547 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 SLC41A3Q96GZ6 507 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 PRRC1Q96M27 445 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 KLHL15Q96M94 604 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 RIMS3Q9UJD0 308 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 OSGIN2Q9Y236 505 aa14.4□□□□□ -0.1
CLN6-216ENST00000636876 A0A0J9YW62 118 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 GJE1A6NN92 205 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 H0Y3Z8 333 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 H0YC42 278 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 EIF1AYO14602 144 aaKnown RBP14.39□□□□□ -0.11
CLN6-216ENST00000636876 ZNF208O43345 1280 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 CHP2O43745 196 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 THY1P04216 161 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 SLC7A1P30825 629 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 YAP1P46937 504 aaKnown RBP14.39□□□□□ -0.11
CLN6-216ENST00000636876 UQCRFS1P47985 274 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 CLK1P49759 484 aaKnown RBP14.39□□□□□ -0.11
CLN6-216ENST00000636876 TPD52P55327 224 aaPredicted RBP14.39□□□□□ -0.11
CLN6-216ENST00000636876 PIN1Q13526 163 aaPredicted RBP14.39□□□□□ -0.11
CLN6-216ENST00000636876 CTU2Q2VPK5 515 aaKnown RBP14.39□□□□□ -0.11
CLN6-216ENST00000636876 IQCCQ4KMZ1 466 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 C1orf146Q5VVC0 180 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 ESPNLQ6ZVH7 1005 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 GDF7Q7Z4P5 450 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 CYP4Z1Q86W10 505 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 SPATA24Q86W54 205 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 LSRQ86X29 649 aaPredicted RBP14.39□□□□□ -0.11
CLN6-216ENST00000636876 DOLPP1Q86YN1 238 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 ADGRG5Q8IZF4 528 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 OR2V1Q8NHB1 315 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 RNF217Q8TC41 542 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 ADGRG7Q96K78 797 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 ZNF300Q96RE9 604 aaPredicted RBP14.39□□□□□ -0.11
CLN6-216ENST00000636876 SEPHS2Q99611 448 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 TUBA1CQ9BQE3 449 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 OR11A1Q9GZK7 315 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 MAGIXQ9H6Y5 334 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 IL1RAPQ9NPH3 570 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 NDUFAF4Q9P032 175 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 SLC7A7Q9UM01 511 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 A4GNTQ9UNA3 340 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 FLNCQ14315 2725 aa14.39□□□□□ -0.11
CLN6-216ENST00000636876 UBR5O95071 2799 aaPredicted RBP14.39□□□□□ -0.11
CLN6-216ENST00000636876 MPDZO75970 2070 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 A0A087WUJ7 227 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 TCRBV3S1A0A5B6 114 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 FIGNL2A6NMB9 653 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 A8MVM7 634 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 AHRRA9YTQ3 701 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 J3KTA2 159 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 hCG_2039718K7EN88 272 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 TNFSF11O14788 317 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 FFAR1O14842 300 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 ADAMDEC1O15204 470 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 WDR1O75083 606 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 PRSS23O95084 383 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 FABP3P05413 133 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 STSP08842 583 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 TFPIP10646 304 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 THRBP10828 461 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 GABRA1P14867 456 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 ITGA2P17301 1181 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 RHCEP18577 417 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 IFNA8P32881 189 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 CASP6P55212 293 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 CHRNB3Q05901 458 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 FAM98BQ52LJ0 330 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms