RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 GOLGA8OA6NCC3 632 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 ZNF716A6NP11 495 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 GOLGA8NF8WBI6 632 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 MRPL33O75394 65 aaKnown RBP16.69■□□□□ 0.26
SMN2-215ENST00000628696 OR12D1P0DN82 309 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 PTAFRP25105 342 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 APOBEC1P41238 236 aaKnown RBP16.69■□□□□ 0.26
SMN2-215ENST00000628696 CLDN8P56748 225 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 OR2B6P58173 313 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 DSCR9P59020 149 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 PDK3Q15120 406 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 TMEM249Q2WGJ8 235 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 ATAD3BQ5T9A4 648 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 C11orf71Q6IPW1 123 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 CCDC103Q8IW40 242 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 EIF1ADQ8N9N8 165 aaKnown RBP16.69■□□□□ 0.26
SMN2-215ENST00000628696 OR4A15Q8NGL6 344 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 PIGXQ8TBF5 258 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 TCP10LQ8TDR4 215 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 RAB8BQ92930 207 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 ARL5BQ96KC2 179 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 TNFRSF13CQ96RJ3 184 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 KCNK17Q96T54 332 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 ZNF350Q9GZX5 532 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 TAS2R16Q9NYV7 291 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 WDR45Q9Y484 360 aa16.69■□□□□ 0.26
SMN2-215ENST00000628696 CUBNO60494 3623 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 GPR171O14626 319 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 ANKRD28O15084 1053 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 BCAS1O75363 584 aaPredicted RBP16.68■□□□□ 0.26
SMN2-215ENST00000628696 CPSF4O95639 269 aaKnown RBP16.68■□□□□ 0.26
SMN2-215ENST00000628696 NTF4P34130 210 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 PGM1P36871 562 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 FOXG1P55316 489 aaPredicted RBP16.68■□□□□ 0.26
SMN2-215ENST00000628696 EMX2Q04743 252 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 MAD2L1Q13257 205 aaPredicted RBP16.68■□□□□ 0.26
SMN2-215ENST00000628696 C6orf52Q5T4I8 152 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 C9orf135Q5VTT2 229 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 TNFAIP8L2Q6P589 184 aaPredicted RBP16.68■□□□□ 0.26
SMN2-215ENST00000628696 B3GLCTQ6Y288 498 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 HMGN2P46Q86SG4 172 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 ZNF525Q8N782 197 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 PPP1R36Q96LQ0 422 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 CCDC106Q9BWC9 280 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 OR11A1Q9GZK7 315 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 MANSC1Q9H8J5 431 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 SLC35A3Q9Y2D2 325 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 ATP23Q9Y6H3 246 aa16.68■□□□□ 0.26
SMN2-215ENST00000628696 A0A096LNT2 108 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 PMS2P2O95744 297 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 FAM157CP0CG43 387 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 SERPINB5P36952 375 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 MAGEA8P43361 318 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 GABRA6Q16445 453 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 OR7E24Q6IFN5 339 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 TYW3Q6IPR3 259 aaKnown RBP16.67■□□□□ 0.26
SMN2-215ENST00000628696 GRINAQ7Z429 371 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 ANKRD46Q86W74 232 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 OR52E4Q8NGH9 312 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 FAM168AQ92567 244 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 NOP53Q9NZM5 478 aaKnown RBP16.67■□□□□ 0.26
SMN2-215ENST00000628696 UPB1Q9UBR1 384 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 CDC42EP3Q9UKI2 254 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 HDGFL3Q9Y3E1 203 aa16.67■□□□□ 0.26
SMN2-215ENST00000628696 RNASET2O00584 256 aaKnown RBP16.66■□□□□ 0.26
SMN2-215ENST00000628696 PHF1O43189 567 aaPredicted RBP16.66■□□□□ 0.26
SMN2-215ENST00000628696 KIAA0513O60268 411 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 AGR2O95994 175 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 LOXL1Q08397 574 aaPredicted RBP16.66■□□□□ 0.26
SMN2-215ENST00000628696 GPAT3Q53EU6 434 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 CASP12Q6UXS9 341 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 ADGRG3Q86Y34 549 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 RIBC1Q8N443 379 aaPredicted RBP16.66■□□□□ 0.26
SMN2-215ENST00000628696 ARFGAP2Q8N6H7 521 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 FAM71CQ8NEG0 241 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 NANOS1Q8WY41 292 aaKnown RBP16.66■□□□□ 0.26
SMN2-215ENST00000628696 ROPN1LQ96C74 230 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 ZG16BQ96DA0 208 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 MUS81Q96NY9 551 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 INPP5KQ9BT40 448 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 BEX2Q9BXY8 128 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 DPY30Q9C005 99 aa16.66■□□□□ 0.26
SMN2-215ENST00000628696 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.66■□□□□ 0.26
SMN2-215ENST00000628696 ELOA3DA6NLF2 546 aaPredicted RBP16.65■□□□□ 0.26
SMN2-215ENST00000628696 DNPH1O43598 174 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 ITGA5P08648 1049 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 SLC25A16P16260 332 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 UQCRC2P22695 453 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 IDH2P48735 452 aaKnown RBP16.65■□□□□ 0.26
SMN2-215ENST00000628696 CLK1P49759 484 aaKnown RBP16.65■□□□□ 0.26
SMN2-215ENST00000628696 SLC16A1P53985 500 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 PDCD2Q16342 344 aaPredicted RBP16.65■□□□□ 0.26
SMN2-215ENST00000628696 ELOA3BQ3SY89 546 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 CYB5R2Q6BCY4 276 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 EMBQ6PCB8 327 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 LSRQ86X29 649 aaPredicted RBP16.65■□□□□ 0.26
SMN2-215ENST00000628696 ELOA3Q8NG57 546 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 MIPOL1Q8TD10 442 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 FKRPQ9H9S5 495 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 POLE3Q9NRF9 147 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms