RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 OR7A10O76100 309 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 FBXO45P0C2W1 286 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 DCKP27707 260 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 SLC6A6P31641 620 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 RPS15P62841 145 aaKnown RBP19.56■□□□□ 0.72
SPAST-204ENST00000621856 TOMM34Q15785 309 aaPredicted RBP19.56■□□□□ 0.72
SPAST-204ENST00000621856 TBCEQ15813 527 aaPredicted RBP19.56■□□□□ 0.72
SPAST-204ENST00000621856 LYPD8Q6UX82 237 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 B3GNT6Q6ZMB0 384 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 GLRX5Q86SX6 157 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 C10orf53Q8N6V4 93 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 ANKK1Q8NFD2 765 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 ZNF420Q8TAQ5 688 aaPredicted RBP19.56■□□□□ 0.72
SPAST-204ENST00000621856 RASL10BQ96S79 203 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 PRRX2Q99811 253 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 SPRY4Q9C004 299 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 ADAM19Q9H013 955 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 MCCC2Q9HCC0 563 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 KLRF1Q9NZS2 232 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 COMMD3-BMI1R4GMX3 469 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 HTR3EA5X5Y0 456 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 C2orf72A6NCS6 295 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 KDM4EB2RXH2 506 aaPredicted RBP19.55■□□□□ 0.72
SPAST-204ENST00000621856 LRRN3E7EW58 273 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 PRODHO43272 600 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 CDC40O60508 579 aaKnown RBP eCLIP19.55■□□□□ 0.72
SPAST-204ENST00000621856 SLC2A10O95528 541 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 LCKP06239 509 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 CDK4P11802 303 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 CCNA2P20248 432 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 TGM1P22735 817 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 CXCR1P25024 350 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 SLC9A3P48764 834 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 C17orf67Q0P5P2 114 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 QPRTQ15274 297 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 COL28A1Q2UY09 1125 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 POMZP3Q6PJE2 187 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 RTL4Q6ZR62 310 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 LNX2Q8N448 690 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 ESX1Q8N693 406 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 SLC15A4Q8N697 577 aa19.55■□□□□ 0.72
SPAST-204ENST00000621856 C9orf43Q8TAL5 461 aaPredicted RBP19.55■□□□□ 0.72
SPAST-204ENST00000621856 ZNF701M0R085 212 aaPredicted RBP19.54■□□□□ 0.72
SPAST-204ENST00000621856 TMEM44Q2T9K0 475 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 SLC35F1Q5T1Q4 408 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 UBE2UQ5VVX9 321 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 SLC46A3Q7Z3Q1 461 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 PPP1R32Q7Z5V6 425 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 CACTIN-AS1Q8N1I8 211 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 SLC43A2Q8N370 569 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 LRRC17Q8N6Y2 441 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 GPR119Q8TDV5 335 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 OTULINQ96BN8 352 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 TMEM80Q96HE8 168 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 NAA50Q9GZZ1 169 aaKnown RBP19.54■□□□□ 0.72
SPAST-204ENST00000621856 METTL7AQ9H8H3 244 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 GALNT9Q9HCQ5 603 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 TAS2R10Q9NYW0 307 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 BAIAP2Q9UQB8 552 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 ZNF337Q9Y3M9 751 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 SDK2Q58EX2 2172 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 ADAM10O14672 748 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 ITGA10O75578 1167 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 TRMUO75648 421 aaKnown RBP19.54■□□□□ 0.72
SPAST-204ENST00000621856 NDUFB2O95178 105 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 PPP1R3DO95685 299 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 ST13P50502 369 aaKnown RBP19.54■□□□□ 0.72
SPAST-204ENST00000621856 IRF3Q14653 427 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 SYT6Q5T7P8 510 aaPredicted RBP19.54■□□□□ 0.72
SPAST-204ENST00000621856 OR5M10Q6IEU7 315 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 OR10G3Q8NGC4 313 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 RFKQ969G6 155 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 C12orf43Q96C57 262 aaKnown RBP19.54■□□□□ 0.72
SPAST-204ENST00000621856 SPACA9Q96E40 222 aaPredicted RBP19.54■□□□□ 0.72
SPAST-204ENST00000621856 TAS2R16Q9NYV7 291 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 PTTG2Q9NZH5 202 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 OSGIN1Q9UJX0 560 aa19.54■□□□□ 0.72
SPAST-204ENST00000621856 OTOGLQ3ZCN5 2332 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 PCNX2A6NKB5 2137 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 MPDZO75970 2070 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 TNFSF15O95150 251 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 IGF2P01344 180 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 SOX3P41225 446 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 POLR2HP52434 150 aaKnown RBP19.53■□□□□ 0.72
SPAST-204ENST00000621856 CDH11P55287 796 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 FOXK2Q01167 660 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 SSPNQ14714 243 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 NTRK2Q16620 822 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 BICRALQ6AI39 1079 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 CXXC5Q7LFL8 322 aaKnown RBP19.53■□□□□ 0.72
SPAST-204ENST00000621856 RNFT2Q96EX2 444 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 CRELD1Q96HD1 420 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 CDCA4Q9BXL8 241 aa19.53■□□□□ 0.72
SPAST-204ENST00000621856 H2AFY2Q9P0M6 372 aaPredicted RBP19.53■□□□□ 0.72
SPAST-204ENST00000621856 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.53■□□□□ 0.72
SPAST-204ENST00000621856 A0A1W2PQ72 361 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 IRGMA1A4Y4 181 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 ANKUB1A6NFN9 424 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 SLC25A12O75746 678 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 ADORA3P0DMS8 318 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms