RNA–Protein interactions for RNA: ENST00000615951.4

CDK11B-206, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-206ENST00000615951 RAB19A4D1S5 217 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 CPSF4LA6NMK7 179 aaKnown RBP17.38■□□□□ 0.37
CDK11B-206ENST00000615951 APOL3O95236 402 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 TRHRP34981 398 aaPredicted RBP17.38■□□□□ 0.37
CDK11B-206ENST00000615951 AVPR1BP47901 424 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 RAB13P51153 203 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 CLDN20P56880 219 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 PSPHP78330 225 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 EFNB1P98172 346 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 GINS1Q14691 196 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 UBXN2BQ14CS0 331 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 ZNF730Q6ZMV8 503 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 RTL4Q6ZR62 310 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 LAX1Q8IWV1 398 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 COX18Q8N8Q8 333 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 SLC37A3Q8NCC5 494 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 OR9A4Q8NGU2 314 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 LMX1AQ8TE12 382 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 SHDQ96IW2 340 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 NELL2Q99435 816 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 CHRNA10Q9GZZ6 450 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 STARD5Q9NSY2 213 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 PTTG3PQ9NZH4 202 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 COPZ2Q9P299 210 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 CLCA2Q9UQC9 943 aa17.38■□□□□ 0.37
CDK11B-206ENST00000615951 FRS3O43559 492 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 SLC43A1O75387 559 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 PTHP01270 115 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 RNH1P13489 461 aaKnown RBP17.37■□□□□ 0.37
CDK11B-206ENST00000615951 MAP2K3P46734 347 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 FAM131AQ6UXB0 335 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 TCEANCQ8N8B7 351 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 SLC41A3Q96GZ6 507 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 ARL5BQ96KC2 179 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 ZFP64Q9NPA5 681 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 CTPS2Q9NRF8 586 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 CTSFQ9UBX1 484 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 MAB21L2Q9Y586 359 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 GOLGA4Q13439 2230 aaKnown RBP17.37■□□□□ 0.37
CDK11B-206ENST00000615951 DNASE2O00115 360 aaPredicted RBP17.37■□□□□ 0.37
CDK11B-206ENST00000615951 NKX2-2O95096 273 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 FPR3P25089 353 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 STAT5AP42229 794 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 OMPP47874 163 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 GDI2P50395 445 aaKnown RBP17.37■□□□□ 0.37
CDK11B-206ENST00000615951 DEFB110Q30KQ9 67 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 OGFOD3Q6PK18 319 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 PRICKLE2Q7Z3G6 844 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 GDF7Q7Z4P5 450 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 RANBP3LQ86VV4 465 aaPredicted RBP17.37■□□□□ 0.37
CDK11B-206ENST00000615951 FGF11Q92914 225 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 C1QTNF6Q9BXI9 259 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 GALNT9Q9HCQ5 603 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 WNT16Q9UBV4 365 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 SPATA2Q9UM82 520 aa17.37■□□□□ 0.37
CDK11B-206ENST00000615951 SIGLEC6O43699 453 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 ORC5O43913 435 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 FMO6PO60774 539 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 MPC2O95563 127 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 PLATP00750 562 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 NID1P14543 1247 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 ZNF136P52737 540 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 IGLV3-21P80748 117 aaPredicted RBP17.36■□□□□ 0.37
CDK11B-206ENST00000615951 FAM53BQ14153 422 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 TIMM50Q3ZCQ8 353 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 MBOAT2Q6ZWT7 520 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 SLC38A3Q99624 504 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 MARVELD1Q9BSK0 173 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 PRR14Q9BWN1 585 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 RAB33BQ9H082 229 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 RBFOX1Q9NWB1 397 aaKnown RBP17.36■□□□□ 0.37
CDK11B-206ENST00000615951 TVP23BQ9NYZ1 205 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 DNAJC27Q9NZQ0 273 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 PLCL2Q9UPR0 1127 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 MRPS33Q9Y291 106 aaKnown RBP17.36■□□□□ 0.37
CDK11B-206ENST00000615951 RPH3AQ9Y2J0 694 aaPredicted RBP17.36■□□□□ 0.37
CDK11B-206ENST00000615951 TP53BP1Q12888 1972 aaPredicted RBP17.36■□□□□ 0.37
CDK11B-206ENST00000615951 HYKKA2RU49 373 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 KLF4O43474 513 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 CBX7O95931 251 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 CT62P0C5K7 136 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 GABRA4P48169 554 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 LCN1P1Q5VSP4 162 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 ZNF595Q8IYB9 648 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 ZNF565Q8N9K5 539 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 OR6C4Q8NGE1 309 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 CEP76Q8TAP6 659 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 MAP3K3Q99759 626 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 LMF2Q9BU23 707 aaKnown RBP17.36■□□□□ 0.37
CDK11B-206ENST00000615951 GSN-AS1Q9NRJ2 163 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 FBXL21Q9UKT6 434 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 EDARQ9UNE0 448 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 KCNK7Q9Y2U2 307 aa17.36■□□□□ 0.37
CDK11B-206ENST00000615951 FOXS1O43638 330 aa17.35■□□□□ 0.37
CDK11B-206ENST00000615951 OR10H2O60403 315 aa17.35■□□□□ 0.37
CDK11B-206ENST00000615951 GPX5O75715 221 aa17.35■□□□□ 0.37
CDK11B-206ENST00000615951 NSA2O95478 260 aaKnown RBP17.35■□□□□ 0.37
CDK11B-206ENST00000615951 NXPH1P58417 271 aa17.35■□□□□ 0.37
CDK11B-206ENST00000615951 HNRNPKP61978 463 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDK11B-206ENST00000615951 LSM11P83369 360 aaKnown RBP eCLIP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms