RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 FN3KQ9H479 309 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 PELI2Q9HAT8 420 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 DLL4Q9NR61 685 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 FAM86C1Q9NVL1 165 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 EP300Q09472 2414 aaPredicted RBP12.11□□□□□ -0.47
FOXN3-219ENST00000615335 FEZF1A0PJY2 475 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 CPED1A4D0V7 1026 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 AKAP8O43823 692 aaKnown RBP12.1□□□□□ -0.47
FOXN3-219ENST00000615335 SOX30O94993 753 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 LPLP06858 475 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 ZNF806P0C7X5 589 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 RHCEP18577 417 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 PCBP3P57721 371 aaKnown RBP12.1□□□□□ -0.47
FOXN3-219ENST00000615335 OR1D5P58170 312 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 RPS7P62081 194 aaKnown RBP12.1□□□□□ -0.47
FOXN3-219ENST00000615335 CRYZQ08257 329 aaKnown RBP12.1□□□□□ -0.47
FOXN3-219ENST00000615335 SPEM2Q0P670 501 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 IL18Q14116 193 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 NR0B2Q15466 257 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 FAM76BQ5HYJ3 339 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 C3orf38Q5JPI3 329 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 NKAIN2Q5VXU1 208 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 SLC25A25Q6KCM7 469 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 CNIH2Q6PI25 160 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 TMIGD1Q6UXZ0 262 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 KRT77Q7Z794 578 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 PAQR7Q86WK9 346 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 FAM129CQ86XR2 697 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 SLC44A2Q8IWA5 706 aaPredicted RBP12.1□□□□□ -0.47
FOXN3-219ENST00000615335 FTMTQ8N4E7 242 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 C12orf45Q8N5I9 185 aaPredicted RBP12.1□□□□□ -0.47
FOXN3-219ENST00000615335 TBC1D19Q8N5T2 526 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 SCARB1Q8WTV0 552 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 ZDHHC12Q96GR4 267 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 SFXN2Q96NB2 322 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 SORBS1Q9BX66 1292 aaKnown RBP12.1□□□□□ -0.47
FOXN3-219ENST00000615335 SLC6A20Q9NP91 592 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 CLN6Q9NWW5 311 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 TAS2R16Q9NYV7 291 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 PPIEQ9UNP9 301 aaKnown RBP12.1□□□□□ -0.47
FOXN3-219ENST00000615335 OTOGLQ3ZCN5 2332 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 D6RAR5 112 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 KLHL18O94889 574 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 RFC3P40938 356 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 CAPZBP47756 277 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 GPR143P51810 404 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 PPP1CAP62136 330 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 CSNK1G2P78368 415 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 MXD1Q05195 221 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 PRSS53Q2L4Q9 553 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 PTCHD4Q6ZW05 846 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 FGD2Q7Z6J4 655 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 SLC30A8Q8IWU4 369 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 PIAS4Q8N2W9 510 aaPredicted RBP12.1□□□□□ -0.47
FOXN3-219ENST00000615335 FLVCR1-AS1Q8TAF5 88 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 ELP5Q8TE02 316 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 B3GAT2Q9NPZ5 323 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 FTSJ1Q9UET6 329 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 FBXL2Q9UKC9 423 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 ERVK-19Q9WJR5 959 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 NUBP2Q9Y5Y2 271 aa12.1□□□□□ -0.47
FOXN3-219ENST00000615335 ZAR1LA6NP61 321 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 GASTP01350 101 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 IFNW1P05000 195 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 SULT1A3P0DMM9 295 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 SULT1A4P0DMN0 295 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 SFTPCP11686 197 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 PEPDP12955 493 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 RAB3BP20337 219 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 GPR3P46089 330 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 AGFG1P52594 562 aaKnown RBP12.09□□□□□ -0.47
FOXN3-219ENST00000615335 CRISP1P54107 249 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 GPR176Q14439 515 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 PUM1Q14671 1186 aaKnown RBP eCLIP12.09□□□□□ -0.47
FOXN3-219ENST00000615335 SGCAQ16586 387 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 AMZ1Q400G9 498 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 PAN3Q58A45 887 aaKnown RBP12.09□□□□□ -0.47
FOXN3-219ENST00000615335 B3GNTL1Q67FW5 361 aaPredicted RBP12.09□□□□□ -0.47
FOXN3-219ENST00000615335 ELP2Q6IA86 826 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 ZNF730Q6ZMV8 503 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 UBE2E3Q969T4 207 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 ABCG4Q9H172 646 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 ZNF768Q9H5H4 540 aaKnown RBP12.09□□□□□ -0.47
FOXN3-219ENST00000615335 NMNAT1Q9HAN9 279 aaPredicted RBP12.09□□□□□ -0.47
FOXN3-219ENST00000615335 SLAMF7Q9NQ25 335 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 RHCGQ9UBD6 479 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 ENTPD4Q9Y227 616 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 LSM2Q9Y333 95 aaKnown RBP12.09□□□□□ -0.47
FOXN3-219ENST00000615335 NPTNQ9Y639 398 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 ARRDC5A6NEK1 342 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 AGRPO00253 132 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 SULT1C2O00338 296 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 OR1F1O43749 312 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 EIF3GO75821 320 aaKnown RBP eCLIP12.09□□□□□ -0.47
FOXN3-219ENST00000615335 RLN2P04090 185 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 HRGP04196 525 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 IL3P08700 152 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 ACAA1P09110 424 aaPredicted RBP12.09□□□□□ -0.47
FOXN3-219ENST00000615335 UQCRC2P22695 453 aa12.09□□□□□ -0.47
FOXN3-219ENST00000615335 CD96P40200 585 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms