RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 WDR45Q9Y484 360 aa15.73■□□□□ 0.11
SMN2-213ENST00000614240 FBN1P35555 2871 aaKnown RBP15.72■□□□□ 0.11
SMN2-213ENST00000614240 OR12D1P0DN82 309 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 CCNA2P20248 432 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 MAGEA8P43361 318 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 OR2B6P58173 313 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 EMX2Q04743 252 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 SPOCK1Q08629 439 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 OR7E24Q6IFN5 339 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 PHC2Q8IXK0 858 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 OR10H5Q8NGA6 315 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 TNFRSF13CQ96RJ3 184 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 KCNK17Q96T54 332 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 CCDC106Q9BWC9 280 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 TAS2R16Q9NYV7 291 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 HDGFL3Q9Y3E1 203 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 SLC25A15Q9Y619 301 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 ATP23Q9Y6H3 246 aa15.72■□□□□ 0.11
SMN2-213ENST00000614240 GOLGA8QA0A0J9YX86 632 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 GOLGA8OA6NCC3 632 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 ZNF716A6NP11 495 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 GOLGA8NF8WBI6 632 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 RNASET2O00584 256 aaKnown RBP15.71■□□□□ 0.11
SMN2-213ENST00000614240 CPSF4O95639 269 aaKnown RBP15.71■□□□□ 0.11
SMN2-213ENST00000614240 PMS2P2O95744 297 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 BMP4P12644 408 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 FKBP2P26885 142 aaKnown RBP15.71■□□□□ 0.11
SMN2-213ENST00000614240 PGM1P36871 562 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 HPCAP84074 193 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 IFFO1Q0D2I5 559 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 MAPK14Q16539 360 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 TMEM249Q2WGJ8 235 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 TNFAIP8L2Q6P589 184 aaPredicted RBP15.71■□□□□ 0.11
SMN2-213ENST00000614240 GRINAQ7Z429 371 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 CCDC103Q8IW40 242 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 RIBC1Q8N443 379 aaPredicted RBP15.71■□□□□ 0.11
SMN2-213ENST00000614240 ARFGAP2Q8N6H7 521 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 VPS37AQ8NEZ2 397 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 FAM168AQ92567 244 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 RAB8BQ92930 207 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 ARL5BQ96KC2 179 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 PPP1R36Q96LQ0 422 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 BEX2Q9BXY8 128 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 OR11A1Q9GZK7 315 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 POLE3Q9NRF9 147 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 UPB1Q9UBR1 384 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 CDC42EP3Q9UKI2 254 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 CR1P17927 2039 aa15.71■□□□□ 0.11
SMN2-213ENST00000614240 KIAA0513O60268 411 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 SLC25A16P16260 332 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 UQCRC2P22695 453 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 ARRB2P32121 409 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 CLK1P49759 484 aaKnown RBP15.7■□□□□ 0.1
SMN2-213ENST00000614240 CHRNB3Q05901 458 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 GPAT3Q53EU6 434 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 C6orf52Q5T4I8 152 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 C9orf135Q5VTT2 229 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 C11orf71Q6IPW1 123 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 CASP12Q6UXS9 341 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 HMGN2P46Q86SG4 172 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 ANKRD46Q86W74 232 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 ZNF525Q8N782 197 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 MIPOL1Q8TD10 442 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 ROPN1LQ96C74 230 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 INPP5KQ9BT40 448 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 DPY30Q9C005 99 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 MANSC1Q9H8J5 431 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 FKRPQ9H9S5 495 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.7■□□□□ 0.1
SMN2-213ENST00000614240 PARPBPQ9NWS1 579 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 NUP214P35658 2090 aaPredicted RBP15.7■□□□□ 0.1
SMN2-213ENST00000614240 STAB1Q9NY15 2570 aa15.7■□□□□ 0.1
SMN2-213ENST00000614240 DNPH1O43598 174 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 FAM157CP0CG43 387 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 CHI3L1P36222 383 aaPredicted RBP15.69■□□□□ 0.1
SMN2-213ENST00000614240 IDH2P48735 452 aaKnown RBP15.69■□□□□ 0.1
SMN2-213ENST00000614240 KHKP50053 298 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 LOXL1Q08397 574 aaPredicted RBP15.69■□□□□ 0.1
SMN2-213ENST00000614240 PDCD2Q16342 344 aaPredicted RBP15.69■□□□□ 0.1
SMN2-213ENST00000614240 GABRA6Q16445 453 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 ANXA8L1Q5VT79 327 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 TYW3Q6IPR3 259 aaKnown RBP15.69■□□□□ 0.1
SMN2-213ENST00000614240 ZNF544Q6NX49 715 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 ADGRG3Q86Y34 549 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 OR52E4Q8NGH9 312 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 OIT3Q8WWZ8 545 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.69■□□□□ 0.1
SMN2-213ENST00000614240 MUS81Q96NY9 551 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 NAA11Q9BSU3 229 aaPredicted RBP15.69■□□□□ 0.1
SMN2-213ENST00000614240 ASIC5Q9NY37 505 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 TMEM181Q9P2C4 612 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 MALT1Q9UDY8 824 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 PMF1-BGLAPU3KQ54 211 aa15.69■□□□□ 0.1
SMN2-213ENST00000614240 ELOA3DA6NLF2 546 aaPredicted RBP15.68■□□□□ 0.1
SMN2-213ENST00000614240 PHF1O43189 567 aaPredicted RBP15.68■□□□□ 0.1
SMN2-213ENST00000614240 BCAS1O75363 584 aaPredicted RBP15.68■□□□□ 0.1
SMN2-213ENST00000614240 BPGMP07738 259 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 NUDT17P0C025 328 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 NTF4P34130 210 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 HTR3AP46098 478 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms