RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 LSRQ86X29 649 aaPredicted RBP12.5□□□□□ -0.41
TMEM254-213ENST00000613758 PARP8Q8N3A8 854 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 MDS2Q8NDY4 140 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 TMEM239Q8WW34 195 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 TMEM234Q8WY98 164 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 HDAC2Q92769 488 aaKnown RBP12.5□□□□□ -0.41
TMEM254-213ENST00000613758 DEPPQ9NTK1 212 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 HSPE1-MOB4S4R3N1 261 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 A0A087WUJ7 227 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 ELOA3DA6NLF2 546 aaPredicted RBP12.5□□□□□ -0.41
TMEM254-213ENST00000613758 K7ENP7 123 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 ADAP00813 363 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 PTNP21246 168 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 RBM34P42696 430 aaKnown RBP12.5□□□□□ -0.41
TMEM254-213ENST00000613758 GPR85P60893 370 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 ELOA3BQ3SY89 546 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 SLC25A25Q6KCM7 469 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 INO80CQ6PI98 192 aaPredicted RBP12.5□□□□□ -0.41
TMEM254-213ENST00000613758 ZER1Q7Z7L7 766 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 RNF113BQ8IZP6 322 aaKnown RBP12.5□□□□□ -0.41
TMEM254-213ENST00000613758 ELOA3Q8NG57 546 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 ST8SIA1Q92185 356 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 GNRHR2Q96P88 292 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.5□□□□□ -0.41
TMEM254-213ENST00000613758 ZNF556Q9HAH1 456 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 MED17Q9NVC6 651 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 REV1Q9UBZ9 1251 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 AASSQ9UDR5 926 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 MGAT4BQ9UQ53 548 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 VDAC3Q9Y277 283 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 EML6Q6ZMW3 1958 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 PCNX3Q9H6A9 2034 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 C1QTNF9BB2RNN3 333 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 WISP1O95388 367 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 SP1P08047 785 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 C1QTNF9P0C862 333 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 PRKCAP17252 672 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 CRHBPP24387 322 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 IFNGR2P38484 337 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 UGT2B15P54855 530 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 TUBA4AP68366 448 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 IL5RAQ01344 420 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 RBM48Q5RL73 367 aaKnown RBP12.49□□□□□ -0.41
TMEM254-213ENST00000613758 IGFL2Q6UWQ7 119 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 GRINAQ7Z429 371 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 NRMQ8IXM6 262 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 SETD9Q8NE22 299 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 CNIH3Q8TBE1 160 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 PIGXQ8TBF5 258 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 UBE2FQ969M7 185 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 C1GALT1C1Q96EU7 318 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 FAM173AQ9BQD7 235 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 ZNF426Q9BUY5 554 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 DGCR6LQ9BY27 220 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 HES7Q9BYE0 225 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 C12orf10Q9HB07 376 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 KLHL1Q9NR64 748 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 OSGIN1Q9UJX0 560 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 MED31Q9Y3C7 131 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 URB1O60287 2271 aaKnown RBP12.49□□□□□ -0.41
TMEM254-213ENST00000613758 PIP5K1CO60331 668 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 CBR3O75828 277 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 TP53P04637 393 aaPredicted RBP12.49□□□□□ -0.41
TMEM254-213ENST00000613758 CD46P15529 392 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 CXCR1P25024 350 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 GGT2P36268 569 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 HTR3AP46098 478 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 RPL5P46777 297 aaKnown RBP12.49□□□□□ -0.41
TMEM254-213ENST00000613758 POLR2HP52434 150 aaKnown RBP12.49□□□□□ -0.41
TMEM254-213ENST00000613758 MAD2L1BPQ15013 274 aaPredicted RBP12.49□□□□□ -0.41
TMEM254-213ENST00000613758 C1orf94Q6P1W5 598 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 POMZP3Q6PJE2 187 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 P3H2Q8IVL5 708 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 SULF2Q8IWU5 870 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 OR2M7Q8NG81 312 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 PFN4Q8NHR9 129 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 GNPDA2Q8TDQ7 276 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 C5orf34Q96MH7 638 aa12.49□□□□□ -0.41
TMEM254-213ENST00000613758 SMAD5Q99717 465 aaKnown RBP12.49□□□□□ -0.41
TMEM254-213ENST00000613758 TUBA8Q9NY65 449 aaPredicted RBP12.49□□□□□ -0.41
TMEM254-213ENST00000613758 A0A087WXM4 84 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 PINLYPA6NC86 204 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 FAM47E-STBD1D6RA91 191 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 KPNA4O00629 521 aaPredicted RBP12.48□□□□□ -0.41
TMEM254-213ENST00000613758 CCNA2P20248 432 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 ALDH3B2P48448 385 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 PLPPR5Q32ZL2 321 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 SATL1Q86VE3 508 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 MEX3DQ86XN8 651 aaKnown RBP12.48□□□□□ -0.41
TMEM254-213ENST00000613758 SGCDQ92629 289 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 NPAS1Q99742 590 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 GPA33Q99795 319 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 APOL4Q9BPW4 351 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 UCK2Q9BZX2 261 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 KRCC1Q9NPI7 259 aaPredicted RBP12.48□□□□□ -0.41
TMEM254-213ENST00000613758 MEPEQ9NQ76 525 aaPredicted RBP12.48□□□□□ -0.41
TMEM254-213ENST00000613758 CEP295Q9C0D2 2601 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 ACACAQ13085 2346 aa12.48□□□□□ -0.41
TMEM254-213ENST00000613758 FREM2Q5SZK8 3169 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms