RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 WDR60Q8WVS4 1066 aa15.39■□□□□ 0.05
PRKN-209ENST00000612485 ZNF775Q96BV0 537 aaPredicted RBP15.39■□□□□ 0.05
PRKN-209ENST00000612485 MAELQ96JY0 434 aaKnown RBP15.39■□□□□ 0.05
PRKN-209ENST00000612485 ZNF300Q96RE9 604 aaPredicted RBP15.39■□□□□ 0.05
PRKN-209ENST00000612485 SLC38A1Q9H2H9 487 aa15.39■□□□□ 0.05
PRKN-209ENST00000612485 CXorf56Q9H5V9 222 aa15.39■□□□□ 0.05
PRKN-209ENST00000612485 ESRP2Q9H6T0 727 aaKnown RBP15.39■□□□□ 0.05
PRKN-209ENST00000612485 TMBIM4Q9HC24 238 aa15.39■□□□□ 0.05
PRKN-209ENST00000612485 PRSS50Q9UI38 385 aa15.39■□□□□ 0.05
PRKN-209ENST00000612485 DSCAMO60469 2012 aa15.39■□□□□ 0.05
PRKN-209ENST00000612485 ARID1AO14497 2285 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 IGKV3D-15A0A087WSY6 115 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 FAM171A2A8MVW0 826 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 CNOT4O95628 575 aaKnown RBP15.38■□□□□ 0.05
PRKN-209ENST00000612485 DBIP07108 87 aaKnown RBP15.38■□□□□ 0.05
PRKN-209ENST00000612485 CD3EP07766 207 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 UQCRBP14927 111 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 IL7RP16871 459 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 PTH2RP49190 550 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 NCMAPQ5T1S8 102 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 SSX8Q7RTT4 187 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 ADGRG3Q86Y34 549 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 PIGXQ8TBF5 258 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 PNPT1Q8TCS8 783 aaKnown RBP15.38■□□□□ 0.05
PRKN-209ENST00000612485 CNOT9Q92600 299 aaKnown RBP15.38■□□□□ 0.05
PRKN-209ENST00000612485 AKAP1Q92667 903 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRKN-209ENST00000612485 ZNF75CPQ92670 426 aaPredicted RBP15.38■□□□□ 0.05
PRKN-209ENST00000612485 TLCD1Q96CP7 247 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 Q96MF0 132 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 BDH2Q9BUT1 245 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 ZIM2Q9NZV7 527 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 RNF115Q9Y4L5 304 aa15.38■□□□□ 0.05
PRKN-209ENST00000612485 ANP32DO95626 131 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 PAX1P15863 534 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 RPS4Y1P22090 263 aaKnown RBP15.37■□□□□ 0.05
PRKN-209ENST00000612485 POLR2HP52434 150 aaKnown RBP15.37■□□□□ 0.05
PRKN-209ENST00000612485 PLAURQ03405 335 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 SLC9B1Q4ZJI4 515 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 COX20Q5RI15 118 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 ADAM5Q6NVV9 412 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 MSANTD1Q6ZTZ1 278 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 PEX5LQ8IYB4 626 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 PIWIL2Q8TC59 973 aaKnown RBP15.37■□□□□ 0.05
PRKN-209ENST00000612485 IGFBPL1Q8WX77 278 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 DDIT4LQ96D03 193 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 ARL5BQ96KC2 179 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 RMND5AQ9H871 391 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 CALML5Q9NZT1 146 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 P2RX2Q9UBL9 471 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 TRAPPC4Q9Y296 219 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 NOSIPQ9Y314 301 aaKnown RBP15.37■□□□□ 0.05
PRKN-209ENST00000612485 ROS1P08922 2347 aa15.37■□□□□ 0.05
PRKN-209ENST00000612485 FREM1Q5H8C1 2179 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 NIPBLQ6KC79 2804 aaeCLIP15.36■□□□□ 0.05
PRKN-209ENST00000612485 TMED7-TICAM2A0A0A6YYA0 188 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 CFAP73A6NFT4 308 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 FAAHO00519 579 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 AP3D1O14617 1153 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 GPR171O14626 319 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 KLF11O14901 512 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 UBDO15205 165 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 CLOCKO15516 846 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 ZNF208O43345 1280 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 ADAM11O75078 769 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 LYZL6O75951 148 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 ZCCHC18P0CG32 403 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 HOXB4P17483 251 aaPredicted RBP15.36■□□□□ 0.05
PRKN-209ENST00000612485 CCNA2P20248 432 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 SLC1A3P43003 542 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 MAP2K6P52564 334 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 OR2B6P58173 313 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 STK11Q15831 433 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 CLEC9AQ6UXN8 241 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 DNAJC14Q6Y2X3 702 aaPredicted RBP15.36■□□□□ 0.05
PRKN-209ENST00000612485 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.36■□□□□ 0.05
PRKN-209ENST00000612485 ZNF440Q8IYI8 595 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 MUCL1Q96DR8 90 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 ITCHQ96J02 903 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 COX4I2Q96KJ9 171 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 SMR3AQ99954 134 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 OR11A1Q9GZK7 315 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 SDR39U1Q9NRG7 319 aaPredicted RBP15.36■□□□□ 0.05
PRKN-209ENST00000612485 TMEM181Q9P2C4 612 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 PRDM4Q9UKN5 801 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 TMED7Q9Y3B3 224 aa15.36■□□□□ 0.05
PRKN-209ENST00000612485 ZNF716A6NP11 495 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 H7C1Q1 480 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 GGT1P19440 569 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 COX5AP20674 150 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 IGHV1-2P23083 117 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 EDNRAP25101 427 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 CRATP43155 626 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 SLC16A1P53985 500 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 SLC35A1P78382 337 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 EPS8Q12929 822 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 PPA1Q15181 289 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 LIN52Q52LA3 116 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 TIMM23BQ5SRD1 257 aa15.35■□□□□ 0.05
PRKN-209ENST00000612485 MRPL2Q5T653 305 aaKnown RBP15.35■□□□□ 0.05
PRKN-209ENST00000612485 FBXW9Q5XUX1 488 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms