RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 SUSD5O60279 629 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 PIP5K1CO60331 668 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 GADD45GO95257 159 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 BMP7P18075 431 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 CXCR1P25024 350 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 SFTPDP35247 375 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 APOBEC1P41238 236 aaKnown RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 UGT2B15P54855 530 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 CLDN15P56746 228 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 CLDN20P56880 219 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 EXOC3L2Q2M3D2 409 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 GLYR1Q49A26 553 aaPredicted RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 FGD3Q5JSP0 725 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 ZFP1Q6P2D0 407 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 OR4C15Q8NGM1 316 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 PFN4Q8NHR9 129 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 NEIL3Q8TAT5 605 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 SMPDL3BQ92485 455 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 STMN2Q93045 179 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 ARL5BQ96KC2 179 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 PIGQQ9BRB3 760 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 LDAHQ9H6V9 325 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 MEPEQ9NQ76 525 aaPredicted RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 AGPAT4Q9NRZ5 378 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 PRRC2CQ9Y520 2896 aaKnown RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 TRGV5A0A0B4J1U4 118 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 C7orf72A4D263 438 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 ELOA3DA6NLF2 546 aaPredicted RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 TTLL8A6PVC2 850 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 LRRN3E7EW58 273 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 TNFRSF11BO00300 401 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 KPNA4O00629 521 aaPredicted RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 IGHG3P01860 377 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 FASP25445 335 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 ADH6P28332 368 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 EIF1P41567 113 aaKnown RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 LIMS1P48059 325 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 SUCLG1P53597 346 aaKnown RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 TRAM2Q15035 370 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 RCN1Q15293 331 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 ATP6AP1Q15904 470 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 INAQ16352 499 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 C3AR1Q16581 482 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 ELOA3BQ3SY89 546 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 TMEM176BQ3YBM2 270 aaPredicted RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 AAGABQ6PD74 315 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 FAM180AQ6UWF9 173 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 FGD2Q7Z6J4 655 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 ELOA3Q8NG57 546 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 FAR1Q8WVX9 515 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 KTI12Q96EK9 354 aaPredicted RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 ALPK1Q96QP1 1244 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 ZNF426Q9BUY5 554 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 C20orf141Q9NUB4 165 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 DNAJB9Q9UBS3 223 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 CHRNA9Q9UGM1 479 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 SAMHD1Q9Y3Z3 626 aaKnown RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 A0A1B0GTH9 108 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 A0A1W2PNR3 127 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 A0A1W2PRQ8 180 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 GNGT2O14610 69 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 ATXN7O15265 892 aaPredicted RBP10.86□□□□□ -0.67
CLK4-215ENST00000611733 LDLRP01130 860 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 CRYABP02511 175 aaKnown RBP10.86□□□□□ -0.67
CLK4-215ENST00000611733 PRB1P04280 392 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 PRKACGP22612 351 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 HMGA2P52926 109 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 DGCR6Q14129 220 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 PRICKLE2Q7Z3G6 844 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 CHERPQ8IWX8 916 aaKnown RBP10.86□□□□□ -0.67
CLK4-215ENST00000611733 UBQLNLQ8IYU4 475 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 NR4A3Q92570 626 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 POLR2J2Q9GZM3 115 aaKnown RBP10.86□□□□□ -0.67
CLK4-215ENST00000611733 POLR2J3Q9H1A7 115 aaKnown RBP10.86□□□□□ -0.67
CLK4-215ENST00000611733 EXO5Q9H790 373 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 YY1AP1Q9H869 796 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 SELENONQ9NZV5 590 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 RALYQ9UKM9 306 aaKnown RBP10.86□□□□□ -0.67
CLK4-215ENST00000611733 ZNF407Q9C0G0 2248 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 IGSF10Q6WRI0 2623 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 A0A0J9YW62 118 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 PNMTP11086 282 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 ANPEPP15144 967 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 ZNF17P17021 662 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 CBLP22681 906 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 HTR3AP46098 478 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 LHX2P50458 406 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 TDGF1P3P51864 188 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 SRYQ05066 204 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 LTBQ06643 244 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 PLXDC2Q6UX71 529 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 TMEM239Q8WW34 195 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 ABTB1Q969K4 478 aaPredicted RBP10.86□□□□□ -0.67
CLK4-215ENST00000611733 TAAR8Q969N4 342 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 TIMP4Q99727 224 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 REEP1Q9H902 201 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 PLSCR2Q9NRY7 297 aa10.86□□□□□ -0.67
CLK4-215ENST00000611733 SH3PXD2BA1X283 911 aa10.85□□□□□ -0.67
CLK4-215ENST00000611733 ADAMDEC1O15204 470 aa10.85□□□□□ -0.67
CLK4-215ENST00000611733 SEC14L5O43304 696 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms