RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 GOLGA8NF8WBI6 632 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 TLX2O43763 284 aaPredicted RBP11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 CD5LO43866 347 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 KIAA0513O60268 411 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 AGR2O95994 175 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 GUSBP08236 651 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 ZNF83P51522 516 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 FOXG1P55316 489 aaPredicted RBP11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 CHRNEQ04844 493 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 AP1ARQ63HQ0 302 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 ABLIM2Q6H8Q1 611 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 HMBOX1Q6NT76 420 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 TMEM108Q6UXF1 575 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 FRRS1Q6ZNA5 592 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 ADGRG3Q86Y34 549 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 CCDC103Q8IW40 242 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 ZNF781Q8N8C0 355 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 FAM71CQ8NEG0 241 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 VPS37AQ8NEZ2 397 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 APH1AQ96BI3 265 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 ROPN1LQ96C74 230 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 ZHX1-C8orf76Q96EF9 292 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 RADILQ96JH8 1075 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 PKNOX2Q96KN3 472 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 ZIM3Q96PE6 472 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 RHNO1Q9BSD3 238 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 OR11A1Q9GZK7 315 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 POLE3Q9NRF9 147 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 CHRNA9Q9UGM1 479 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 MGAT4BQ9UQ53 548 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 SLC25A15Q9Y619 301 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 HEATR1Q9H583 2144 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 PRAMEF27A3QJZ7 478 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 CLDN24A6NM45 220 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 GPR171O14626 319 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 ANKRD28O15084 1053 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 GPRIN2O60269 458 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 MRPL33O75394 65 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 PMS2P2O95744 297 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 CCNA2P20248 432 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 PTAFRP25105 342 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 FKBP2P26885 142 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 TTKP33981 857 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 IDH2P48735 452 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 CLK1P49759 484 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 OR2B6P58173 313 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 VSNL1P62760 191 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 IRX1P78414 480 aaPredicted RBP11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 KCNJ10P78508 379 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 FUT5Q11128 374 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 CASP8Q14790 479 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 NRF1Q16656 503 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 GPAT3Q53EU6 434 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 ANXA8L1Q5VT79 327 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 SAXO2Q658L1 398 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 SLC22A25Q6T423 547 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 GRINAQ7Z429 371 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 HIPK1Q86Z02 1210 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 PIGXQ8TBF5 258 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 OIT3Q8WWZ8 545 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 CNOT9Q92600 299 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 ADAD1Q96M93 576 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 MUS81Q96NY9 551 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 DHRS9Q9BPW9 319 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 C1QTNF6Q9BXI9 259 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 CACNG6Q9BXT2 260 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 C20orf27Q9GZN8 174 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 CBLN4Q9NTU7 201 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 ASB6Q9NWX5 421 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 POU2F3Q9UKI9 436 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 HDGFL3Q9Y3E1 203 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 FBN3Q75N90 2809 aa11.78□□□□□ -0.52
POLR2J3-219ENST00000608621 PLCE1Q9P212 2302 aa11.77□□□□□ -0.52
POLR2J3-219ENST00000608621 IGHV4-30-2A0A087WSY4 118 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 C1QCP02747 245 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 MYZAPP0CAP1 466 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 CD40P25942 277 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 MAGEA8P43361 318 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 NUDT6P53370 316 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 SLC16A1P53985 500 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 ABCE1P61221 599 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 SPOCK1Q08629 439 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 CHI3L2Q15782 390 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 GABRA6Q16445 453 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 C11orf71Q6IPW1 123 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 EMBQ6PCB8 327 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 KLHL17Q6TDP4 642 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 LSRQ86X29 649 aaPredicted RBP11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 FBXL14Q8N1E6 418 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 ARFGAP2Q8N6H7 521 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 OR52E4Q8NGH9 312 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 TESCQ96BS2 214 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 NEURL3Q96EH8 262 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 EXOSC3Q9NQT5 275 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 TAS2R16Q9NYV7 291 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 TMEM181Q9P2C4 612 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 MARCOQ9UEW3 520 aaPredicted RBP11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 TRAPPC4Q9Y296 219 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms