RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 ADGRG3Q86Y34 549 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 CMIPQ8IY22 773 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 BBS10Q8TAM1 723 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 SLC25A43Q8WUT9 341 aaPredicted RBP12.9□□□□□ -0.34
HDDC2-204ENST00000608295 PIK3IP1Q96FE7 263 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 PIF1Q9H611 641 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 NDRG3Q9UGV2 375 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 OSGIN1Q9UJX0 560 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 ABCA4P78363 2273 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 TRBV5-3A0A0A0MS03 114 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 A0A0G2JPF8 293 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 A0A1W2PP18 115 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 A0A1W2PPR1 153 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 ENO4A6NNW6 628 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 HNRNPCL2B2RXH8 293 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 ZNF814B7Z6K7 855 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 HNRNPCL3B7ZW38 293 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 C16orf97H3BN30 126 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 SIAH2O43255 324 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 HNRNPCL1O60812 293 aaKnown RBP12.89□□□□□ -0.35
HDDC2-204ENST00000608295 PRKD3O94806 890 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 OPN1SWP03999 348 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 PABPC4LP0CB38 370 aaKnown RBP12.89□□□□□ -0.35
HDDC2-204ENST00000608295 HNRNPCL4P0DMR1 293 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 ARAFP10398 606 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 UQCRBP14927 111 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 DNAJA1P31689 397 aaKnown RBP12.89□□□□□ -0.35
HDDC2-204ENST00000608295 APOBEC1P41238 236 aaKnown RBP12.89□□□□□ -0.35
HDDC2-204ENST00000608295 POLR2HP52434 150 aaKnown RBP12.89□□□□□ -0.35
HDDC2-204ENST00000608295 RAC3P60763 192 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 CDK6Q00534 326 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 RASGEF1BQ0VAM2 473 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 SCARB2Q14108 478 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 RNPS1Q15287 305 aaKnown RBP12.89□□□□□ -0.35
HDDC2-204ENST00000608295 CYP51A1Q16850 503 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 GLIPR1L2Q4G1C9 344 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 RNF220Q5VTB9 566 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 TFAP2EQ6VUC0 442 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 C22orf34Q6ZV56 151 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 STK32CQ86UX6 486 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 COMTD1Q86VU5 262 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 CXorf67Q86X51 503 aaPredicted RBP12.89□□□□□ -0.35
HDDC2-204ENST00000608295 WFDC8Q8IUA0 241 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 CCDC103Q8IW40 242 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 RNF217Q8TC41 542 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 OIT3Q8WWZ8 545 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 DACH2Q96NX9 599 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 PSD2Q9BQI7 771 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 RABEP2Q9H5N1 569 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 KLHL9Q9P2J3 617 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 PRSS50Q9UI38 385 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 NDUFAF1Q9Y375 327 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 CHST2Q9Y4C5 530 aa12.89□□□□□ -0.35
HDDC2-204ENST00000608295 PRR14LQ5THK1 2151 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 PGM3O95394 542 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 HRGP04196 525 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 ARFIP2P53365 341 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 COPZ1P61923 177 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 CSNK2A1P68400 391 aaPredicted RBP12.88□□□□□ -0.35
HDDC2-204ENST00000608295 GTF2IRD2BQ6EKJ0 949 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 ABLIM2Q6H8Q1 611 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 DLEU7Q6UYE1 221 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 STAC2Q6ZMT1 411 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 TMPPEQ6ZT21 453 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 GTF2IRD2Q86UP8 949 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 ZHX1-C8orf76Q96EF9 292 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 PRR14Q9BWN1 585 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 SPATA9Q9BWV2 254 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 GLRX2Q9NS18 164 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 CCM2LQ9NUG4 571 aaPredicted RBP12.88□□□□□ -0.35
HDDC2-204ENST00000608295 THUMPD1Q9NXG2 353 aaKnown RBP12.88□□□□□ -0.35
HDDC2-204ENST00000608295 ELOVL5Q9NYP7 299 aa12.88□□□□□ -0.35
HDDC2-204ENST00000608295 ING1Q9UK53 422 aaPredicted RBP12.88□□□□□ -0.35
HDDC2-204ENST00000608295 EVPLLA8MZ36 301 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 TPST1O60507 370 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 CYTIPO60759 359 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 THBS1P07996 1170 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 IMPDH2P12268 514 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 BMP2P12643 396 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 PPIBP23284 216 aaKnown RBP12.87□□□□□ -0.35
HDDC2-204ENST00000608295 CXCR1P25024 350 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 ADSLP30566 484 aaPredicted RBP12.87□□□□□ -0.35
HDDC2-204ENST00000608295 ACAA2P42765 397 aaKnown RBP12.87□□□□□ -0.35
HDDC2-204ENST00000608295 SLC1A3P43003 542 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 MAGEA8P43361 318 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 ART1P52961 327 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 OR7A5Q15622 319 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 REEP3Q6NUK4 255 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 ZNF440Q8IYI8 595 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 DDIT4LQ96D03 193 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 HS3ST6Q96QI5 342 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 CGREF1Q99674 301 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 SIKE1Q9BRV8 207 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 RSPO3Q9BXY4 272 aaPredicted RBP12.87□□□□□ -0.35
HDDC2-204ENST00000608295 ACTR6Q9GZN1 396 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 PLSCR4Q9NRQ2 329 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 ARMCX1Q9P291 453 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 ZNF232Q9UNY5 417 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 ANGPT4Q9Y264 503 aa12.87□□□□□ -0.35
HDDC2-204ENST00000608295 FBP2O00757 339 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms