RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 LILRA2Q8N149 483 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 LSM14AQ8ND56 463 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 PAPD5Q8NDF8 572 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 ELOA3Q8NG57 546 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 OR52J3Q8NH60 311 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 TMEM255BQ8WV15 326 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 POP5Q969H6 163 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 SLC38A4Q969I6 547 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 DUS3LQ96G46 650 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 GPR137Q96N19 417 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 BARD1Q99728 777 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 PIP5K1AQ99755 562 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 PRSS27Q9BQR3 290 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 FNDC11Q9BVV2 318 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 OR11A1Q9GZK7 315 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 POLR2J2Q9GZM3 115 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 POLR2J3Q9H1A7 115 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 OCEL1Q9H607 264 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 AGPAT4Q9NRZ5 378 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 CCM2LQ9NUG4 571 aaPredicted RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 CHRNA9Q9UGM1 479 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 ACAD8Q9UKU7 415 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 FAM32AQ9Y421 112 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 CACNA1BQ00975 2339 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 TRBV4-1A0A0J9YWV2 114 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 A0A1B0GVC2 190 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 H3BNX3 289 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 KPNA4O00629 521 aaPredicted RBP6.92□□□□□ -1.3
MSH6-211ENST00000606499 AQP7O14520 342 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 PIP5K1CO60331 668 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 HCN1O60741 890 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 C1QL1O75973 258 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 KRT36O76013 467 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 GADD45GO95257 159 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 ACTL6AO96019 429 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 CST1P01037 141 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 H1F0P07305 194 aaKnown RBP6.92□□□□□ -1.3
MSH6-211ENST00000606499 TFPIP10646 304 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 PNMTP11086 282 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 ADH6P28332 368 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 HTR3AP46098 478 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 UGT2B15P54855 530 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 ELF3P78545 371 aaPredicted RBP6.92□□□□□ -1.3
MSH6-211ENST00000606499 LSM11P83369 360 aaKnown RBP eCLIP6.92□□□□□ -1.3
MSH6-211ENST00000606499 ST3GAL3Q11203 375 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 TRAM2Q15035 370 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.92□□□□□ -1.3
MSH6-211ENST00000606499 SOWAHCQ53LP3 525 aaPredicted RBP6.92□□□□□ -1.3
MSH6-211ENST00000606499 SYT14P1Q58G82 188 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 NHSL2Q5HYW2 709 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 C1QL3Q5VWW1 255 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 VASNQ6EMK4 673 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 OR2T5Q6IEZ7 315 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 ARHGAP11AQ6P4F7 1023 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 AAGABQ6PD74 315 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 LINC00114Q6XXX2 140 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 GHDCQ8N2G8 530 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 PIK3C3Q8NEB9 887 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 OR2T29Q8NH02 315 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 CPT1CQ8TCG5 803 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 SLC7A13Q8TCU3 470 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 DNAJA4Q8WW22 397 aaPredicted RBP6.92□□□□□ -1.3
MSH6-211ENST00000606499 LRTOMTQ8WZ04 291 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 STMN2Q93045 179 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 ABTB1Q969K4 478 aaPredicted RBP6.92□□□□□ -1.3
MSH6-211ENST00000606499 KTI12Q96EK9 354 aaPredicted RBP6.92□□□□□ -1.3
MSH6-211ENST00000606499 ARL5BQ96KC2 179 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 DHRS1Q96LJ7 313 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 ZNF347Q96SE7 839 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 TIMP4Q99727 224 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 ZNF426Q9BUY5 554 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 NMNAT1Q9HAN9 279 aaPredicted RBP6.92□□□□□ -1.3
MSH6-211ENST00000606499 ARMC1Q9NVT9 282 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 SELENONQ9NZV5 590 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 CAMK2AQ9UQM7 478 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 AP4S1Q9Y587 144 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 U3KQV3 271 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 ZNF462Q96JM2 2506 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 SHANK1Q9Y566 2161 aa6.92□□□□□ -1.3
MSH6-211ENST00000606499 GCN1Q92616 2671 aaKnown RBP6.92□□□□□ -1.3
MSH6-211ENST00000606499 SPTA1P02549 2419 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 MED12Q93074 2177 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 A0A087WUJ7 227 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 A0A087WUU8 490 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 A0A0J9YW62 118 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 A0A1W2PNR3 127 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 A0A1W2PRQ8 180 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 A8MVM7 634 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 LRRN3E7EW58 273 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 NPIPA2E9PIF3 369 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 NPIPA3F8WFD2 350 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 EIF1AYO14602 144 aaKnown RBP6.91□□□□□ -1.3
MSH6-211ENST00000606499 TNFSF11O14788 317 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 THRBP10828 461 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 EDN3P14138 238 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 ZNF708P17019 499 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 IFNA8P32881 189 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 GCKP35557 465 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 RPS5P46782 204 aaKnown RBP6.91□□□□□ -1.3
MSH6-211ENST00000606499 LIMS1P48059 325 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms