RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CYS1Q717R9 158 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 PID1Q7Z2X4 250 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SERPINA9Q86WD7 417 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 PAQR7Q86WK9 346 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SKA3Q8IX90 412 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 RDH10Q8IZV5 341 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 OR4N4Q8N0Y3 316 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 CERS5Q8N5B7 392 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 OR4C15Q8NGM1 316 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SPATA22Q8NHS9 363 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 TRMT10AQ8TBZ6 339 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 LPAR1Q92633 364 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 HGDQ93099 445 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 S100PBPQ96BU1 408 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 COQ10AQ96MF6 247 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 FNDC11Q9BVV2 318 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 NKX6-2Q9C056 277 aaPredicted RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 IL22Q9GZX6 179 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 AKTIPQ9H8T0 292 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ELOVL3Q9HB03 270 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 C14orf105Q9NVL8 296 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 MED11Q9P086 117 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 METTL1Q9UBP6 276 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ASB1Q9Y576 335 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 EVPLQ92817 2033 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 C13orf42A0A1B0GVH6 325 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CPED1A4D0V7 1026 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 VSTM2BA6NLU5 285 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 AIPO00170 330 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 DLEU1O43261 78 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SSX4O60224 188 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CTNSO60931 367 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 DDNO94850 711 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 RCBTB2O95199 551 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 GCP02774 474 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SPP1P10451 314 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SRFP11831 508 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ARSBP15848 533 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CEBPBP17676 345 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 MYL9P24844 172 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ITGA3P26006 1051 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TIA1P31483 386 aaKnown RBP eCLIP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ADMP35318 185 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 MPLP40238 635 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PTGFRP43088 359 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 MAGEA2P43356 314 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 KCNJ3P48549 501 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 MARCKSL1P49006 195 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PJVKQ0ZLH3 352 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SIX1Q15475 284 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 DEFB115Q30KQ5 88 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 AVPI1Q5T686 147 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TMEM236Q5W0B7 351 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SCIMPQ6UWF3 145 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 MBOAT1Q6ZNC8 495 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TTLL10Q6ZVT0 673 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 KCTD1Q719H9 257 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CACUL1Q86Y37 369 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 DNAJC22Q8N4W6 341 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 HORMAD2Q8N7B1 307 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM46DQ8NEK8 389 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 OR1L4Q8NGR5 311 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 HAS1Q92839 578 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SLC38A4Q969I6 547 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 MYADMQ96S97 322 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 P2RY13Q9BPV8 354 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 EBF4Q9BQW3 602 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 UGT2B28Q9BY64 529 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 NANSQ9NR45 359 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 MTMR10Q9NXD2 777 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 OPTCQ9UBM4 332 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PHF11Q9UIL8 331 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 FOXJ3Q9UPW0 622 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 E7ESA3 106 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 I6L893 689 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 NRP1O14786 923 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 FADS1O60427 444 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 HPGDSO60760 199 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF217O75362 1048 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 KRT33AO76009 404 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ATG12O94817 140 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 FOLR2P14207 255 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 UCHL3P15374 230 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PVALBP20472 110 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 NPR2P20594 1047 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 IVDP26440 423 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 AHRP35869 848 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 MAGEA6P43360 314 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 RFX2P48378 723 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 LHX1P48742 406 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 RAB2AP61019 212 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 RAB5BP61020 215 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 FKBP3Q00688 224 aaKnown RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 GOLGA7BQ2TAP0 167 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 C18orf21Q32NC0 220 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TPRG1LQ5T0D9 272 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TXNRD3NBQ6F5E7 133 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 OR2A2Q6IF42 318 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 DEF8Q6ZN54 512 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CTU1Q7Z7A3 348 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms