RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 HDAC2Q92769 488 aaKnown RBP16.35■□□□□ 0.21
VRK3-225ENST00000601912 ADNPQ9H2P0 1102 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 RASSF1Q9NS23 344 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 TBC1D23Q9NUY8 699 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 MED17Q9NVC6 651 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 TMED7Q9Y3B3 224 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 DOCK10Q96BY6 2186 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 IGKV1D-42A0A075B6H8 117 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 EIF4E1BA6NMX2 242 aaKnown RBP16.34■□□□□ 0.21
VRK3-225ENST00000601912 ZNF891A8MT65 544 aaPredicted RBP16.34■□□□□ 0.21
VRK3-225ENST00000601912 CDK2AP1O14519 115 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 HCN1O60741 890 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 CCNA2P20248 432 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 ELK4P28324 431 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 APOBEC1P41238 236 aaKnown RBP16.34■□□□□ 0.21
VRK3-225ENST00000601912 SOX8P57073 446 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 CDK5Q00535 292 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 SRSF6Q13247 344 aaKnown RBP16.34■□□□□ 0.21
VRK3-225ENST00000601912 TOP3AQ13472 1001 aaPredicted RBP16.34■□□□□ 0.21
VRK3-225ENST00000601912 CTU2Q2VPK5 515 aaKnown RBP16.34■□□□□ 0.21
VRK3-225ENST00000601912 RBM48Q5RL73 367 aaKnown RBP16.34■□□□□ 0.21
VRK3-225ENST00000601912 C6orf141Q5SZD1 244 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 ARSKQ6UWY0 536 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 MDGA2Q7Z553 956 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 ENTHD1Q8IYW4 607 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 FADS6Q8N9I5 356 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 WDSUB1Q8N9V3 476 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 OR52L1Q8NGH7 329 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 FANK1Q8TC84 345 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 FGF11Q92914 225 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 UTP23Q9BRU9 249 aaKnown RBP16.34■□□□□ 0.21
VRK3-225ENST00000601912 TSSK6Q9BXA6 273 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 PRRG3Q9BZD7 231 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 SLC25A19Q9HC21 320 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 TIMMDC1Q9NPL8 285 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 LRFN1Q9P244 771 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 RNF6Q9Y252 685 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 POLHQ9Y253 713 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 VDAC3Q9Y277 283 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 SNPHO15079 494 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 SUSD5O60279 629 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 CH25HO95992 272 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 SLC9A3P48764 834 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 DLX5P56178 289 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 KCTD21Q4G0X4 260 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 AGAP7PQ5VUJ5 663 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 TMEM154Q6P9G4 183 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 C5orf46Q6UWT4 87 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 PTCHD4Q6ZW05 846 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 ADGRG3Q86Y34 549 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 C10orf53Q8N6V4 93 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 PSD4Q8NDX1 1056 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 OR1J4Q8NGS1 313 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 OR13C2Q8NGS9 318 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 CNIH3Q8TBE1 160 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 TRUB1Q8WWH5 349 aaKnown RBP16.34■□□□□ 0.21
VRK3-225ENST00000601912 TMEM41AQ96HV5 264 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 MRGPRX4Q96LA9 322 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 AGAP4Q96P64 663 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 SCNM1Q9BWG6 230 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 PLA2G12AQ9BZM1 189 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 OR52D1Q9H346 318 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 BLOC1S6Q9UL45 172 aa16.34■□□□□ 0.21
VRK3-225ENST00000601912 B4DXG7 233 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 OR7A10O76100 309 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 FUT1P19526 365 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 CD96P40200 585 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 MAP2K6P52564 334 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 INPP5JQ15735 1006 aaPredicted RBP16.33■□□□□ 0.2
VRK3-225ENST00000601912 ZBED5Q49AG3 693 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 CLEC12AQ5QGZ9 265 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 C12orf73Q69YU5 71 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 SMARCD3Q6STE5 483 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 IQCF1Q8N6M8 205 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 OR2T33Q8NG76 320 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 OR51A7Q8NH64 312 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 RHOXF1Q8NHV9 184 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 KCNE4Q8WWG9 221 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 UBE2FQ969M7 185 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 NTNG2Q96CW9 530 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 C1GALT1C1Q96EU7 318 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 SAMD8Q96LT4 415 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 JSRP1Q96MG2 331 aaPredicted RBP16.33■□□□□ 0.2
VRK3-225ENST00000601912 SLC38A2Q96QD8 506 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 PROK2Q9HC23 129 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 FBXL2Q9UKC9 423 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 SIGLEC7Q9Y286 467 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 ZNF337Q9Y3M9 751 aa16.33■□□□□ 0.2
VRK3-225ENST00000601912 PCNX3Q9H6A9 2034 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 A0A087WZY1 265 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 A8MVM7 634 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 ETV2O00321 342 aaPredicted RBP16.32■□□□□ 0.2
VRK3-225ENST00000601912 PTP4A3O75365 173 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 EIF1P41567 113 aaKnown RBP16.32■□□□□ 0.2
VRK3-225ENST00000601912 CXCR4P61073 352 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 CSNK2BP67870 215 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 EGR4Q05215 589 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 CDC20Q12834 499 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 TUBA3CQ13748 450 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 PLPPR5Q32ZL2 321 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms