RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 HEPHL1Q6MZM0 1159 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 SEZ6L2Q6UXD5 910 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 FRRS1Q6ZNA5 592 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 ZNF433Q8N7K0 673 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 OR8J2Q8NGG1 315 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 SLC25A43Q8WUT9 341 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 CNOT9Q92600 299 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 HTRA1Q92743 480 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 ARL5BQ96KC2 179 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 C20orf27Q9GZN8 174 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 PNPOQ9NVS9 261 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 CHRNA9Q9UGM1 479 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 RAP2CQ9Y3L5 183 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 SHISA9B4DS77 424 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 M0R1B8 84 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 ETV2O00321 342 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 MRPL33O75394 65 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 CD8AP01732 235 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 LBPP18428 481 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 KCNJ10P78508 379 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 KRTAP1-1Q07627 177 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 FUT5Q11128 374 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 SMU1Q2TAY7 513 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 FAM174BQ3ZCQ3 159 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 TIMM23BQ5SRD1 257 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 FBXW9Q5XUX1 488 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 SAXO2Q658L1 398 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 EMBQ6PCB8 327 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 SLC22A25Q6T423 547 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 RNF130Q86XS8 419 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 ANKFN1Q8N957 763 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 TRAF4Q9BUZ4 470 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 CCDC106Q9BWC9 280 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 HEATR1Q9H583 2144 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 FAIMQ9NVQ4 179 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 CR1P17927 2039 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 CHD3Q12873 2000 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 ABCA1O95477 2261 aa15.51■□□□□ 0.07
SHKBP1-223ENST00000600552 TMED7-TICAM2A0A0A6YYA0 188 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 OR5H1A6NKK0 313 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 AP3D1O14617 1153 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 ANKRD28O15084 1053 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 DNAJA2O60884 412 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 SCN2BO60939 215 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 GSNP06396 782 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 FOXG1P55316 489 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 SPOCK1Q08629 439 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 STX3Q13277 289 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 ETFDHQ16134 617 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 SYPL1Q16563 259 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 ABLIM2Q6H8Q1 611 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 CASP12Q6UXS9 341 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 ZNF621Q6ZSS3 439 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 GRINAQ7Z429 371 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 ADGRG3Q86Y34 549 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 OR52E4Q8NGH9 312 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 PIGXQ8TBF5 258 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 PNPT1Q8TCS8 783 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 MIPOL1Q8TD10 442 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 NEURL3Q96EH8 262 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 SORT1Q99523 831 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 INPP5KQ9BT40 448 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 ASB6Q9NWX5 421 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 B3GALT5Q9Y2C3 310 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 TMED7Q9Y3B3 224 aa15.5■□□□□ 0.07
SHKBP1-223ENST00000600552 PRAMEF27A3QJZ7 478 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 ZNF716A6NP11 495 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 BIRC5O15392 142 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 CRLF1O75462 422 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 COX5AP20674 150 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 MAGEA8P43361 318 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 NUDT6P53370 316 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 CLNS1AP54105 237 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 UFM1P61960 85 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 CASP8Q14790 479 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 AGAP6Q5VW22 663 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 KLHL17Q6TDP4 642 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 TMEM108Q6UXF1 575 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 P2RY8Q86VZ1 359 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 ZIM3Q96PE6 472 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 RHNO1Q9BSD3 238 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 CACNG6Q9BXT2 260 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 POLE3Q9NRF9 147 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 UPB1Q9UBR1 384 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 HDGFL3Q9Y3E1 203 aa15.49■□□□□ 0.07
SHKBP1-223ENST00000600552 TMEM72A0PK05 275 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 CCDC154A6NI56 674 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 E7EQL1 145 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 E9PBE3 544 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 HMGN4O00479 90 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 GPR171O14626 319 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 PGM3O95394 542 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 PMS2P2O95744 297 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 NR2F1P10589 423 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 CDH2P19022 906 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 TACR3P29371 465 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 NTF4P34130 210 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 FABP6P51161 128 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 DEPDC4Q8N2C3 294 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms