RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 DGCR6Q14129 220 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 C3orf33Q6P1S2 294 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 GGNQ86UU5 652 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 CYP4Z1Q86W10 505 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 SLC25A43Q8WUT9 341 aaPredicted RBP11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 ADGRG7Q96K78 797 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 TIMP4Q99727 224 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 FUZQ9BT04 418 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 FNDC11Q9BVV2 318 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 ANKRD19PQ9H560 264 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 SLC7A7Q9UM01 511 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 NCKAP5O14513 1909 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 PCNX3Q9H6A9 2034 aa11.4□□□□□ -0.59
CHMP2A-206ENST00000600118 ELOA3DA6NLF2 546 aaPredicted RBP11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 B8ZZF3 427 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 H3BML4 177 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 H3BNX3 289 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 ENTPD5O75356 428 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 PRB1P04280 392 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 H1F0P07305 194 aaKnown RBP11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 PEPDP12955 493 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 CPN1P15169 458 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 POU3F2P20265 443 aaPredicted RBP11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 CXCR1P25024 350 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 IFNA8P32881 189 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 CLK1P49759 484 aaKnown RBP11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 CLDN20P56880 219 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 EGR4Q05215 589 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 TRAM2Q15035 370 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.39□□□□□ -0.593e-7■■□□□ 12.8
CHMP2A-206ENST00000600118 CTU2Q2VPK5 515 aaKnown RBP11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 ELOA3BQ3SY89 546 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 POMZP3Q6PJE2 187 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 NKAIN4Q8IVV8 208 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 C10orf67Q8IYJ2 551 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 LILRA2Q8N149 483 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 ZNF843Q8N446 348 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 ELOA3Q8NG57 546 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 STK35Q8TDR2 534 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 SARAFQ96BY9 339 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 WDYHV1Q96HA8 205 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 TMEM43Q9BTV4 400 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 PRDM14Q9GZV8 571 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 EXO5Q9H790 373 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 YY1AP1Q9H869 796 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 SELENONQ9NZV5 590 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 RHCGQ9UBD6 479 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 AP4S1Q9Y587 144 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 SPIN1Q9Y657 262 aaPredicted RBP11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 CFAP46Q8IYW2 2715 aa11.39□□□□□ -0.59
CHMP2A-206ENST00000600118 KALRNO60229 2985 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 A0A0J9YW62 118 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 ZC3H12DA2A288 527 aaKnown RBP11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 A8MVM7 634 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 H0YC42 278 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 ADAMDEC1O15204 470 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 FZD7O75084 574 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 CCNA2P20248 432 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 RBM34P42696 430 aaKnown RBP11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 LIMS1P48059 325 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 HMGA2P52926 109 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 SUCLG1P53597 346 aaKnown RBP11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 TPD52P55327 224 aaPredicted RBP11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 SMIM11AP58511 58 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 TMEM176BQ3YBM2 270 aaPredicted RBP11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 SYT14P1Q58G82 188 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 C1QL3Q5VWW1 255 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 OR2T5Q6IEZ7 315 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 ZFP1Q6P2D0 407 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 GFRALQ6UXV0 394 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 ESPNLQ6ZVH7 1005 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 ST6GALNAC3Q8NDV1 305 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 OR4C15Q8NGM1 316 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 OR2T29Q8NH02 315 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 SLC7A13Q8TCU3 470 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 PYDC1Q8WXC3 89 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 ARL5BQ96KC2 179 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 KLHL15Q96M94 604 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 HS6ST2Q96MM7 605 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 PTDSS2Q9BVG9 487 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 POTEKPQ9BYX7 375 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 SLC19A3Q9BZV2 496 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 OR11A1Q9GZK7 315 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 TMEM185BQ9H7F4 350 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 COQ10BQ9H8M1 238 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 VNN3Q9NY84 501 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 TNFRSF10DQ9UBN6 386 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 ZNF835Q9Y2P0 537 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 TESMINQ9Y4I5 508 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 CHD6Q8TD26 2715 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 COL6A6A6NMZ7 2263 aa11.38□□□□□ -0.59
CHMP2A-206ENST00000600118 A0A087WUU8 490 aa11.37□□□□□ -0.59
CHMP2A-206ENST00000600118 TRBV4-1A0A0J9YWV2 114 aa11.37□□□□□ -0.59
CHMP2A-206ENST00000600118 GJE1A6NN92 205 aa11.37□□□□□ -0.59
CHMP2A-206ENST00000600118 NPIPA2E9PIF3 369 aa11.37□□□□□ -0.59
CHMP2A-206ENST00000600118 NPIPA3F8WFD2 350 aa11.37□□□□□ -0.59
CHMP2A-206ENST00000600118 BCKDKO14874 412 aa11.37□□□□□ -0.59
CHMP2A-206ENST00000600118 ZNHIT1O43257 154 aa11.37□□□□□ -0.59
CHMP2A-206ENST00000600118 TIPRLO75663 272 aa11.37□□□□□ -0.59
CHMP2A-206ENST00000600118 KRT36O76013 467 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms