RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	MXRA5	Q9NR99	2828 aa		9.27	□□□□□ -0.92
LSM4-205	ENST00000597776	IGHV4-30-2	A0A087WSY4	118 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	CIB4	A0PJX0	185 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	PRAMEF27	A3QJZ7	478 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	CCT8L1P	A6NM43	557 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776		E7EQL1	145 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	AP3D1	O14617	1153 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	SCN2B	O60939	215 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	UQCRC2	P22695	453 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	APOBEC1	P41238	236 aa	Known RBP	9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	KHK	P50053	298 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	OR2B6	P58173	313 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	CHI3L2	Q15782	390 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	GPAT3	Q53EU6	434 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	SPANXN4	Q5MJ08	99 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	C9orf135	Q5VTT2	229 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	AGAP6	Q5VW22	663 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	SAXO2	Q658L1	398 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	SLC22A25	Q6T423	547 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	B3GLCT	Q6Y288	498 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	GRINA	Q7Z429	371 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	P2RY8	Q86VZ1	359 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	CNOT9	Q92600	299 aa	Known RBP	9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	APH1A	Q96BI3	265 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	ZHX1-C8orf76	Q96EF9	292 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	C1QTNF6	Q9BXI9	259 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	C20orf27	Q9GZN8	174 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	BARX1	Q9HBU1	254 aa	Predicted RBP	9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	FAIM	Q9NVQ4	179 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	ASB6	Q9NWX5	421 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	PCDHGB4	Q9UN71	923 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	SLC35A3	Q9Y2D2	325 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	SLC25A15	Q9Y619	301 aa		9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	SPIN1	Q9Y657	262 aa	Predicted RBP	9.27	□□□□□ -0.93
LSM4-205	ENST00000597776	ABCA1	O95477	2261 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	GOLGA8Q	A0A0J9YX86	632 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	PRSS51	A0A1B0GVH4	220 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	GOLGA8O	A6NCC3	632 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	GOLGA8N	F8WBI6	632 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776		M0R1B8	84 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	ANKRD28	O15084	1053 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	CD5L	O43866	347 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	GPRIN2	O60269	458 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	PMS2P2	O95744	297 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	AGR2	O95994	175 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	SERPINE1	P05121	402 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	ITGA5	P08648	1049 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	CD40	P25942	277 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	CHI3L1	P36222	383 aa	Predicted RBP	9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	IDH2	P48735	452 aa	Known RBP	9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	NUDT6	P53370	316 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	NME5	P56597	212 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	ABCE1	P61221	599 aa	Known RBP	9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	CASP8	Q14790	479 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	PDK3	Q15120	406 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	SMU1	Q2TAY7	513 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	C11orf71	Q6IPW1	123 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	HMBOX1	Q6NT76	420 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	TMEM108	Q6UXF1	575 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	CASP12	Q6UXS9	341 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	ADGRG3	Q86Y34	549 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	ARFGAP2	Q8N6H7	521 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	ANKFN1	Q8N957	763 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	OR52E4	Q8NGH9	312 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	PIGX	Q8TBF5	258 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	AEN	Q8WTP8	325 aa	Known RBP	9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	ZBTB9	Q96C00	473 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	NEURL3	Q96EH8	262 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	TEX37	Q96LM6	180 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	ZIM3	Q96PE6	472 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	SLC35A5	Q9BS91	424 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	REPIN1	Q9BWE0	567 aa	Known RBP	9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	ROPN1B	Q9BZX4	212 aa	Predicted RBP	9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	GRIP2	Q9C0E4	1043 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	SAP130	Q9H0E3	1048 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	ROPN1	Q9HAT0	212 aa	Predicted RBP	9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	POLE3	Q9NRF9	147 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	TAS2R16	Q9NYV7	291 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	MALT1	Q9UDY8	824 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	MARCO	Q9UEW3	520 aa	Predicted RBP	9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	POU2F3	Q9UKI9	436 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	HDGFL3	Q9Y3E1	203 aa		9.26	□□□□□ -0.93
LSM4-205	ENST00000597776	STAB1	Q9NY15	2570 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776		A0A096LNT2	108 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	TMED7-TICAM2	A0A0A6YYA0	188 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	ZC3H12D	A2A288	527 aa	Known RBP	9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	FAM234B	A2RU67	622 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776		E9PBE3	544 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	HMGN4	O00479	90 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	GPR171	O14626	319 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	TLX2	O43763	284 aa	Predicted RBP	9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	MRPL33	O75394	65 aa	Known RBP	9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	CHRM4	P08173	479 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	GUSB	P08236	651 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	MYZAP	P0CAP1	466 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	DHRS4L1	P0CG22	281 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	IMPDH2	P12268	514 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	PTAFR	P25105	342 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	TTK	P33981	857 aa		9.25	□□□□□ -0.93
LSM4-205	ENST00000597776	FABP6	P51161	128 aa		9.25	□□□□□ -0.93

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