RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 SMPDL3BQ92485 455 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 C3orf49Q96BT1 292 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 TMEM185BQ9H7F4 350 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 SERINC1Q9NRX5 453 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 PNPLA3Q9NST1 481 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 RPS6KB2Q9UBS0 482 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 ESPL1Q14674 2120 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 TMED7-TICAM2A0A0A6YYA0 188 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 A0A1B0GWA3 101 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 PRRG2O14669 202 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 ZNF708P17019 499 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 CLDN20P56880 219 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 KCNC4Q03721 635 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 SRYQ05066 204 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 SELENBP1Q13228 472 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 C3AR1Q16581 482 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.48□□□□□ -0.252e-8■■■■■ 36.5
DDX49-204ENST00000595858 ENTPD8Q5MY95 495 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 ZFP1Q6P2D0 407 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 CD163Q86VB7 1156 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 PM20D2Q8IYS1 436 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 PYURFQ96I23 114 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 PRDM14Q9GZV8 571 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 C6orf203Q9P0P8 240 aaPredicted RBP13.48□□□□□ -0.25
DDX49-204ENST00000595858 CHRNA9Q9UGM1 479 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 OSGIN2Q9Y236 505 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 TMED7Q9Y3B3 224 aa13.48□□□□□ -0.25
DDX49-204ENST00000595858 H0YC42 278 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 STAMBPO95630 424 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 CALRP27797 417 aaKnown RBP13.47□□□□□ -0.25
DDX49-204ENST00000595858 UQCRFS1P47985 274 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 SUCLG1P53597 346 aaKnown RBP13.47□□□□□ -0.25
DDX49-204ENST00000595858 TPD52P55327 224 aaPredicted RBP13.47□□□□□ -0.25
DDX49-204ENST00000595858 CLDN15P56746 228 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 EIF2S3LQ2VIR3 472 aaKnown RBP13.47□□□□□ -0.25
DDX49-204ENST00000595858 MTX3Q5HYI7 312 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 C3orf33Q6P1S2 294 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 DEF8Q6ZN54 512 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 ATG4DQ86TL0 474 aaPredicted RBP13.47□□□□□ -0.25
DDX49-204ENST00000595858 TSPYL5Q86VY4 417 aaPredicted RBP13.47□□□□□ -0.25
DDX49-204ENST00000595858 DOLPP1Q86YN1 238 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 UBQLNLQ8IYU4 475 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 ATP6V1C2Q8NEY4 427 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 ADAMTS16Q8TE57 1224 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 PHF10Q8WUB8 498 aaKnown RBP13.47□□□□□ -0.25
DDX49-204ENST00000595858 DNAJA4Q8WW22 397 aaPredicted RBP13.47□□□□□ -0.25
DDX49-204ENST00000595858 AMBRA1Q9C0C7 1298 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 ALKBH4Q9NXW9 302 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 CAMK2AQ9UQM7 478 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 V9GYQ6 96 aa13.47□□□□□ -0.25
DDX49-204ENST00000595858 A0A0B4J2E0 115 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 A0A1B0GX12 115 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 TCRBV5S2A0A599 114 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 CPSF4LA6NMK7 179 aaKnown RBP13.46□□□□□ -0.25
DDX49-204ENST00000595858 SEMA7AO75326 666 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 IFNW1P05000 195 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 CCNA2P20248 432 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 CXCR1P25024 350 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 SHC1P29353 583 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 SFTPDP35247 375 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 MED21Q13503 144 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 TMEM176BQ3YBM2 270 aaPredicted RBP13.46□□□□□ -0.25
DDX49-204ENST00000595858 ALG10BQ5I7T1 473 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 ZNF585AQ6P3V2 769 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 ZNF613Q6PF04 617 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 ULK3Q6PHR2 472 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 GGNQ86UU5 652 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 LRGUKQ96M69 825 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 TINAGQ9UJW2 476 aa13.46□□□□□ -0.25
DDX49-204ENST00000595858 A0A0J9YW62 118 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 AHRRA9YTQ3 701 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 SEC14L5O43304 696 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 STSP08842 583 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 FKBP2P26885 142 aaKnown RBP13.46□□□□□ -0.26
DDX49-204ENST00000595858 MAP2K6P52564 334 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 CDH12P55289 794 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 TSEN54Q7Z6J9 526 aaKnown RBP13.46□□□□□ -0.26
DDX49-204ENST00000595858 LSRQ86X29 649 aaPredicted RBP13.46□□□□□ -0.26
DDX49-204ENST00000595858 MEIOBQ8N635 442 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 SLC25A43Q8WUT9 341 aaPredicted RBP13.46□□□□□ -0.26
DDX49-204ENST00000595858 SLC38A4Q969I6 547 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 RELTQ969Z4 430 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 SLC47A1Q96FL8 570 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 C7orf34Q96L11 122 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 C12orf10Q9HB07 376 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 SELENONQ9NZV5 590 aa13.46□□□□□ -0.26
DDX49-204ENST00000595858 SPIN1Q9Y657 262 aaPredicted RBP13.46□□□□□ -0.26
DDX49-204ENST00000595858 TMEM72A0PK05 275 aa13.45□□□□□ -0.26
DDX49-204ENST00000595858 TRAPPC13A5PLN9 417 aa13.45□□□□□ -0.26
DDX49-204ENST00000595858 GJE1A6NN92 205 aa13.45□□□□□ -0.26
DDX49-204ENST00000595858 EIF1AYO14602 144 aaKnown RBP13.45□□□□□ -0.26
DDX49-204ENST00000595858 ADAMDEC1O15204 470 aa13.45□□□□□ -0.26
DDX49-204ENST00000595858 ZNF208O43345 1280 aa13.45□□□□□ -0.26
DDX49-204ENST00000595858 THY1P04216 161 aa13.45□□□□□ -0.26
DDX49-204ENST00000595858 GABRA1P14867 456 aa13.45□□□□□ -0.26
DDX49-204ENST00000595858 CA7P43166 264 aa13.45□□□□□ -0.26
DDX49-204ENST00000595858 CASP6P55212 293 aa13.45□□□□□ -0.26
DDX49-204ENST00000595858 PIN1Q13526 163 aaPredicted RBP13.45□□□□□ -0.26
DDX49-204ENST00000595858 FLOT2Q14254 428 aa13.45□□□□□ -0.26
DDX49-204ENST00000595858 CTU2Q2VPK5 515 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms