RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 SPENQ96T58 3664 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 CSMD1Q96PZ7 3565 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 EXPH5Q8NEV8 1989 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 A0A087WUJ7 227 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 C17orf51A8MQB3 221 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 ADAM10O14672 748 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 MITFO75030 526 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 SNAP29O95721 258 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 ACADSP16219 412 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 CBLP22681 906 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 CXCR1P25024 350 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 TACR3P29371 465 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 RBM34P42696 430 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 ZNF41P51814 821 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 MERTKQ12866 999 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 MFAP5Q13361 173 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 TOMM34Q15785 309 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 WLSQ5T9L3 541 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 KDM4DQ6B0I6 523 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 SPINK14Q6IE38 97 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 ZNF770Q6IQ21 691 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 C1orf94Q6P1W5 598 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 PGBD2Q6P3X8 592 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 LINC00114Q6XXX2 140 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 MDGA2Q7Z553 956 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 GALNT5Q7Z7M9 940 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 PLCZ1Q86YW0 608 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 OR2M3Q8NG83 312 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 OR1J4Q8NGS1 313 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 C3orf49Q96BT1 292 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 TMEM41AQ96HV5 264 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 JSRP1Q96MG2 331 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 FRMD6Q96NE9 622 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 UCK2Q9BZX2 261 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 ADAM19Q9H013 955 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 ZNF552Q9H707 407 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 C12orf10Q9HB07 376 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 PAPOLBQ9NRJ5 636 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 TMEFF2Q9UIK5 374 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 RAB26Q9ULW5 256 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 POFUT2Q9Y2G5 429 aa11.87□□□□□ -0.51
SHKBP1-209ENST00000595803 CELSR2Q9HCU4 2923 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 G3V3Y1 287 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 SNPHO15079 494 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 ADAP00813 363 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 IFI30P13284 250 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 CCNA2P20248 432 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 GSTM3P21266 225 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 HTR3AP46098 478 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 POLR2HP52434 150 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 ARG2P78540 354 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 ALDH6A1Q02252 535 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 PRKCDQ05655 676 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 COX10Q12887 443 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 OR1C1Q15619 314 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 TBR1Q16650 682 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 NHSL2Q5HYW2 709 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 C6orf52Q5T4I8 152 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 TTC23Q5W5X9 447 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 SLC25A25Q6KCM7 469 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 WDR88Q6ZMY6 472 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 GRINAQ7Z429 371 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 ZER1Q7Z7L7 766 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 ATG4DQ86TL0 474 aaPredicted RBP11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 NRMQ8IXM6 262 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 WDSUB1Q8N9V3 476 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 PSD4Q8NDX1 1056 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 FDCSPQ8NFU4 85 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 CYGBQ8WWM9 190 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 ST8SIA1Q92185 356 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 HAS2Q92819 552 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 NIPSNAP1Q9BPW8 284 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 KLHDC3Q9BQ90 382 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 DGCR6LQ9BY27 220 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 TOR3AQ9H497 397 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 RIBC2Q9H4K1 309 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 PROK2Q9HC23 129 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 ENOPH1Q9UHY7 261 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 C15orf41Q9Y2V0 281 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 PCDHGB6Q9Y5F9 930 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 KCNMB2Q9Y691 235 aa11.86□□□□□ -0.51
SHKBP1-209ENST00000595803 CRYBG3Q68DQ2 2970 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 CACNA1DQ01668 2161 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 TMED7-TICAM2A0A0A6YYA0 188 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 OR5H15A6NDH6 313 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 DLGAP1O14490 977 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 CBR3O75828 277 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 NTN1O95631 604 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 CD46P15529 392 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 CAPGP40121 348 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 OMPP47874 163 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 DNASE1L1P49184 302 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 KCNAB2Q13303 367 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 INPP5JQ15735 1006 aaPredicted RBP11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 TIGD3Q6B0B8 471 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 ZNF227Q86WZ6 799 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 FADS6Q8N9I5 356 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 NTNG2Q96CW9 530 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms