RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PTCHD4Q6ZW05 846 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 TMPRSS11FQ6ZWK6 438 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 CDK20Q8IZL9 346 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 CLEC1AQ8NC01 280 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 ELOA3Q8NG57 546 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 NTNG2Q96CW9 530 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 SGCZQ96LD1 299 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 FRMD6Q96NE9 622 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 VCX3AQ9NNX9 186 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 ANKRD10Q9NXR5 420 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 ZNF226Q9NYT6 803 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 OSGIN1Q9UJX0 560 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 PTGES3LE9PB15 166 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 NKX2-8O15522 239 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 WISP1O95388 367 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 GABRB1P18505 474 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 ALDH3B2P48448 385 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 SMSP52788 366 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 CRYZQ08257 329 aaKnown RBP13.8□□□□□ -0.2
VRK3-207ENST00000594092 INPP5JQ15735 1006 aaPredicted RBP13.8□□□□□ -0.2
VRK3-207ENST00000594092 SMN1Q16637 294 aaKnown RBP13.8□□□□□ -0.2
VRK3-207ENST00000594092 RTL4Q6ZR62 310 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 CYP4Z2PQ8N1L4 340 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 THAP4Q8WY91 577 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 TMEM43Q9BTV4 400 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 ANGPTL4Q9BY76 406 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 EGLN3Q9H6Z9 239 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 PROK2Q9HC23 129 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 STMN3Q9NZ72 180 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 TEKT2Q9UIF3 430 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 SNX5Q9Y5X3 404 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 MED13Q9UHV7 2174 aa13.8□□□□□ -0.2
VRK3-207ENST00000594092 CELSR3Q9NYQ7 3312 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 EML6Q6ZMW3 1958 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 UNC119BA6NIH7 251 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 ENO4A6NNW6 628 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 PRKAR1AP10644 381 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 FUT1P19526 365 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 SPINK2P20155 84 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 GINS1Q14691 196 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 ZNF620Q6ZNG0 422 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 KCTD8Q6ZWB6 473 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 MDGA2Q7Z553 956 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 CCDC103Q8IW40 242 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 GPALPP1Q8IXQ4 340 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 ZNF540Q8NDQ6 660 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 OR2M3Q8NG83 312 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 TRUB1Q8WWH5 349 aaKnown RBP13.79□□□□□ -0.2
VRK3-207ENST00000594092 IPCEF1Q8WWN9 437 aaPredicted RBP13.79□□□□□ -0.2
VRK3-207ENST00000594092 OSTF1Q92882 214 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 PLA2G12AQ9BZM1 189 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 SLC19A3Q9BZV2 496 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 SLC25A19Q9HC21 320 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 CCNB1IP1Q9NPC3 277 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 ASPMQ8IZT6 3477 aa13.79□□□□□ -0.2
VRK3-207ENST00000594092 ARGFXA6NJG6 315 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 GIPRP48546 466 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 POLR2HP52434 150 aaKnown RBP13.78□□□□□ -0.2
VRK3-207ENST00000594092 CDK5Q00535 292 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 EGR4Q05215 589 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 ABHD17BQ5VST6 288 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 SLC27A4Q6P1M0 643 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 ARSKQ6UWY0 536 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 GRINAQ7Z429 371 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 ZNF227Q86WZ6 799 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 GALNT16Q8N428 558 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 CLDN22Q8N7P3 220 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 FADS6Q8N9I5 356 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 WDSUB1Q8N9V3 476 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 OR8D4Q8NGM9 314 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 TMEM234Q8WY98 164 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 ST8SIA1Q92185 356 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 PRRG3Q9BZD7 231 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 HHATLQ9HCP6 504 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 PLCXD1Q9NUJ7 323 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 TBC1D23Q9NUY8 699 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 PAK1IP1Q9NWT1 392 aaPredicted RBP13.78□□□□□ -0.2
VRK3-207ENST00000594092 CLN6Q9NWW5 311 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 IL20Q9NYY1 176 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 FBXL2Q9UKC9 423 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 AKAP13Q12802 2813 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 ANKRD33BA6NCL7 494 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 EFCAB9A8MZ26 197 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 M0R129 80 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 MRPS14O60783 128 aaKnown RBP13.78□□□□□ -0.2
VRK3-207ENST00000594092 SAGP10523 405 aaPredicted RBP13.78□□□□□ -0.2
VRK3-207ENST00000594092 PRKCAP17252 672 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 CCNA2P20248 432 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 CXCR1P25024 350 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 CYB561P49447 251 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 RRADP55042 308 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 DLX5P56178 289 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 SNRPGP62308 76 aaKnown RBP13.78□□□□□ -0.2
VRK3-207ENST00000594092 SLC35A2P78381 396 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 FOXB2Q5VYV0 432 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 POMZP3Q6PJE2 187 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 IQCF1Q8N6M8 205 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 OR13C2Q8NGS9 318 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 SGCDQ92629 289 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 SGTBQ96EQ0 304 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms