RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TNFRSF13CQ96RJ3 184 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 OR11A1Q9GZK7 315 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 MALT1Q9UDY8 824 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 CHRNA9Q9UGM1 479 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 MGAT4BQ9UQ53 548 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 ELOA3DA6NLF2 546 aaPredicted RBP14.37□□□□□ -0.11
LIG1-205ENST00000593425 CCT8L1PA6NM43 557 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 M0R1B8 84 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 PMS2P2O95744 297 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 ITGA5P08648 1049 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 DHRS4L1P0CG22 281 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 OR12D1P0DN82 309 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 PTAFRP25105 342 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 RYKP34925 604 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 FABP6P51161 128 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 CLDN8P56748 225 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 LOXL1Q08397 574 aaPredicted RBP14.37□□□□□ -0.11
LIG1-205ENST00000593425 GABRA6Q16445 453 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 ELOA3BQ3SY89 546 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 C16orf62Q7Z3J2 963 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 HMGN2P46Q86SG4 172 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 CCDC103Q8IW40 242 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 FBXL14Q8N1E6 418 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 ELOA3Q8NG57 546 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 OR52E4Q8NGH9 312 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 ZNF563Q8TA94 476 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 TCP10LQ8TDR4 215 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 TMEM158Q8WZ71 300 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 RAB8BQ92930 207 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 C1QTNF6Q9BXI9 259 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 MANSC1Q9H8J5 431 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 ASB6Q9NWX5 421 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 TAS2R16Q9NYV7 291 aa14.37□□□□□ -0.11
LIG1-205ENST00000593425 SPIN1Q9Y657 262 aaPredicted RBP14.37□□□□□ -0.11
LIG1-205ENST00000593425 CLDN24A6NM45 220 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 PHF1O43189 567 aaPredicted RBP14.36□□□□□ -0.11
LIG1-205ENST00000593425 FAM157CP0CG43 387 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 APOBEC1P41238 236 aaKnown RBP14.36□□□□□ -0.11
LIG1-205ENST00000593425 SLC16A1P53985 500 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 DSCR9P59020 149 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 VLDLRP98155 873 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 SLC25A3Q00325 362 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 TNFAIP8L2Q6P589 184 aaPredicted RBP14.36□□□□□ -0.11
LIG1-205ENST00000593425 EMBQ6PCB8 327 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 KLHL17Q6TDP4 642 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 FRRS1Q6ZNA5 592 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 OR4A15Q8NGL6 344 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 PIGXQ8TBF5 258 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 MIPOL1Q8TD10 442 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 ZG16BQ96DA0 208 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 ZHX1-C8orf76Q96EF9 292 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 MUS81Q96NY9 551 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 EXD2Q9NVH0 621 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 SLC35A3Q9Y2D2 325 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 WDR45Q9Y484 360 aa14.36□□□□□ -0.11
LIG1-205ENST00000593425 PRAMEF27A3QJZ7 478 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 H7C417 338 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 PDLIM1O00151 329 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 RNASET2O00584 256 aaKnown RBP14.35□□□□□ -0.11
LIG1-205ENST00000593425 SCN2BO60939 215 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 MRPL33O75394 65 aaKnown RBP14.35□□□□□ -0.11
LIG1-205ENST00000593425 C1QCP02747 245 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 CREB1P16220 341 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 ZNF16P17020 682 aaPredicted RBP14.35□□□□□ -0.11
LIG1-205ENST00000593425 CCNA2P20248 432 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 SERPINB5P36952 375 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 EMX2Q04743 252 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 RAB35Q15286 201 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 C9orf135Q5VTT2 229 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 GRINAQ7Z429 371 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 ANKRD46Q86W74 232 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 ADGRG3Q86Y34 549 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 WDR31Q8NA23 367 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 XAGE5Q8WWM1 108 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 ROPN1LQ96C74 230 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 PPP1R36Q96LQ0 422 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 INPP5KQ9BT40 448 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 AMBRA1Q9C0C7 1298 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 SAP130Q9H0E3 1048 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 ASIC5Q9NY37 505 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 NOP53Q9NZM5 478 aaKnown RBP14.35□□□□□ -0.11
LIG1-205ENST00000593425 HDGFL3Q9Y3E1 203 aa14.35□□□□□ -0.11
LIG1-205ENST00000593425 ALPK2Q86TB3 2170 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 MXRA5Q9NR99 2828 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 GPR171O14626 319 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 ANKRD28O15084 1053 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 DNPH1O43598 174 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 LY6HO94772 140 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 CPSF4O95639 269 aaKnown RBP14.34□□□□□ -0.11
LIG1-205ENST00000593425 BPGMP07738 259 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 SLC25A16P16260 332 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 OR2B6P58173 313 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 PHC1P78364 1004 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 MAD2L1Q13257 205 aaPredicted RBP14.34□□□□□ -0.11
LIG1-205ENST00000593425 PDCD2Q16342 344 aaPredicted RBP14.34□□□□□ -0.11
LIG1-205ENST00000593425 ZNF544Q6NX49 715 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 CASP12Q6UXS9 341 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 RIBC1Q8N443 379 aaPredicted RBP14.34□□□□□ -0.11
LIG1-205ENST00000593425 OR8J2Q8NGG1 315 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 C10orf105Q8TEF2 133 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms