RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CDKN1AP38936 164 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 KHKP50053 298 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 WDR4P57081 412 aaKnown RBP15.9■□□□□ 0.14
H3F3B-209ENST00000589949 RPS4XP62701 263 aaKnown RBP15.9■□□□□ 0.14
H3F3B-209ENST00000589949 KCNJ10P78508 379 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 MAPK11Q15759 364 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 STK11Q15831 433 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 ZNF672Q499Z4 452 aaPredicted RBP15.9■□□□□ 0.14
H3F3B-209ENST00000589949 COX20Q5RI15 118 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 CEP85LQ5SZL2 805 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 ATAD3BQ5T9A4 648 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 OGFOD2Q6N063 350 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 GALNT5Q7Z7M9 940 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 MTDHQ86UE4 582 aaKnown RBP15.9■□□□□ 0.14
H3F3B-209ENST00000589949 RNF130Q86XS8 419 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 CCDC103Q8IW40 242 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 ZNF433Q8N7K0 673 aaPredicted RBP15.9■□□□□ 0.14
H3F3B-209ENST00000589949 SMAP2Q8WU79 429 aaPredicted RBP15.9■□□□□ 0.14
H3F3B-209ENST00000589949 FBXW5Q969U6 566 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 SLC38A1Q9H2H9 487 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 CENPHQ9H3R5 247 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 ESRP2Q9H6T0 727 aaKnown RBP15.9■□□□□ 0.14
H3F3B-209ENST00000589949 WDR55Q9H6Y2 383 aaPredicted RBP15.9■□□□□ 0.14
H3F3B-209ENST00000589949 KCNK9Q9NPC2 374 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 SLC6A13Q9NSD5 602 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 AIG1Q9NVV5 245 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 CHRNA9Q9UGM1 479 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 BTNL2Q9UIR0 455 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 SLC35A3Q9Y2D2 325 aa15.9■□□□□ 0.14
H3F3B-209ENST00000589949 CCDC154A6NI56 674 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 TMCC2O75069 709 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 PGM3O95394 542 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 AGR2O95994 175 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 TFPIP10646 304 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 CCNA2P20248 432 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 PTNP21246 168 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 CHI3L1P36222 383 aaPredicted RBP15.89■□□□□ 0.13
H3F3B-209ENST00000589949 APOBEC1P41238 236 aaKnown RBP15.89■□□□□ 0.13
H3F3B-209ENST00000589949 PPA1Q15181 289 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 GPAT3Q53EU6 434 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 ZNF100Q8IYN0 542 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 SLC25A43Q8WUT9 341 aaPredicted RBP15.89■□□□□ 0.13
H3F3B-209ENST00000589949 VIPAS39Q9H9C1 493 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 EXOSC3Q9NQT5 275 aaKnown RBP15.89■□□□□ 0.13
H3F3B-209ENST00000589949 LIPT1Q9Y234 373 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 GPR45Q9Y5Y3 372 aa15.89■□□□□ 0.13
H3F3B-209ENST00000589949 HIVEP2P31629 2446 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 AGAP5A6NIR3 686 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 PMS2P2O95744 297 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 GSNP06396 782 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 IDH2P48735 452 aaKnown RBP15.88■□□□□ 0.13
H3F3B-209ENST00000589949 CLNS1AP54105 237 aaKnown RBP15.88■□□□□ 0.13
H3F3B-209ENST00000589949 CSNK2A1P68400 391 aaPredicted RBP15.88■□□□□ 0.13
H3F3B-209ENST00000589949 H3F3AP84243 136 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 FAPQ12884 760 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 PDK3Q15120 406 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 DNAJC14Q6Y2X3 702 aaPredicted RBP15.88■□□□□ 0.13
H3F3B-209ENST00000589949 GRINAQ7Z429 371 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 LRRC34Q8IZ02 419 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 VPS37AQ8NEZ2 397 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 ZNF563Q8TA94 476 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 PNPT1Q8TCS8 783 aaKnown RBP15.88■□□□□ 0.13
H3F3B-209ENST00000589949 OIT3Q8WWZ8 545 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 ARL8AQ96BM9 186 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 NGBQ9NPG2 151 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.88■□□□□ 0.13
H3F3B-209ENST00000589949 ADAM21Q9UKJ8 722 aa15.88■□□□□ 0.13
H3F3B-209ENST00000589949 FBN1P35555 2871 aaKnown RBP15.87■□□□□ 0.13
H3F3B-209ENST00000589949 GOLGA8QA0A0J9YX86 632 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 TMEM72A0PK05 275 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 ZC3H12DA2A288 527 aaKnown RBP15.87■□□□□ 0.13
H3F3B-209ENST00000589949 GOLGA8OA6NCC3 632 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 RNF223E7ERA6 249 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 GOLGA8NF8WBI6 632 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 SNUPNO95149 360 aaKnown RBP15.87■□□□□ 0.13
H3F3B-209ENST00000589949 IGHV4-39P01824 125 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 IMPDH2P12268 514 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 GGT1P19440 569 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 RPS4Y1P22090 263 aaKnown RBP15.87■□□□□ 0.13
H3F3B-209ENST00000589949 EPHA3P29320 983 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 MVDP53602 400 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 SPOCK1Q08629 439 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 CLEC12BQ2HXU8 276 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 DPY19L1Q2PZI1 675 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 TIMM23BQ5SRD1 257 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 FBXW9Q5XUX1 488 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 ARFGAP2Q8N6H7 521 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 ANKRD42Q8N9B4 389 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 TRNT1Q96Q11 434 aaKnown RBP15.87■□□□□ 0.13
H3F3B-209ENST00000589949 OR52E6Q96RD3 313 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 PANX1Q96RD7 426 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 PAIP2Q9BPZ3 127 aaKnown RBP15.87■□□□□ 0.13
H3F3B-209ENST00000589949 OSGIN1Q9UJX0 560 aa15.87■□□□□ 0.13
H3F3B-209ENST00000589949 GDF2Q9UK05 429 aaPredicted RBP15.87■□□□□ 0.13
H3F3B-209ENST00000589949 NOSIPQ9Y314 301 aaKnown RBP15.87■□□□□ 0.13
H3F3B-209ENST00000589949 TMED7-TICAM2A0A0A6YYA0 188 aa15.86■□□□□ 0.13
H3F3B-209ENST00000589949 A0A1W2PR80 420 aa15.86■□□□□ 0.13
H3F3B-209ENST00000589949 OR5H1A6NKK0 313 aa15.86■□□□□ 0.13
H3F3B-209ENST00000589949 SNNO75324 88 aaPredicted RBP15.86■□□□□ 0.13
H3F3B-209ENST00000589949 RAD51DO75771 328 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms