RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 COQ5Q5HYK3 327 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 LRIF1Q5T3J3 769 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 AP1ARQ63HQ0 302 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 HBMQ6B0K9 141 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 OR2A2Q6IF42 318 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 CCDC121Q6ZUS5 278 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 ESPNLQ6ZVH7 1005 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 YTHDF3Q7Z739 585 aaKnown RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 GGNQ86UU5 652 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 CMIPQ8IY22 773 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 GCNT2Q8N0V5 402 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 LILRA2Q8N149 483 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 METTL25Q8N6Q8 603 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 POU5F2Q8N7G0 328 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 RELL2Q8NC24 303 aaPredicted RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 ATP6V1C2Q8NEY4 427 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 POC1BQ8TC44 478 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 WDR60Q8WVS4 1066 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 TMEM234Q8WY98 164 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 PMM1Q92871 262 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 ZG16BQ96DA0 208 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 FAM46AQ96IP4 442 aaKnown RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 NSL1Q96IY1 281 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 MRGPRX4Q96LA9 322 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 SPOCK3Q9BQ16 436 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 SFXN3Q9BWM7 321 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 PRRG4Q9BZD6 226 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 ENKD1Q9H0I2 346 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 QRSL1Q9H0R6 528 aaKnown RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 PAQR5Q9NXK6 330 aaPredicted RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 LEF1Q9UJU2 399 aaPredicted RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 MCTS1Q9ULC4 181 aaKnown RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 LOC100653049A0A140TA62 436 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 EVPLLA8MZ36 301 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 C5orf58C9J3I9 102 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 TNFSF11O14788 317 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 HNRNPCL1O60812 293 aaKnown RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 ATP5HO75947 161 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 KRT34O76011 436 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 SYNGR4O95473 234 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 CRHP06850 196 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 TFPTP0C1Z6 253 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 IL7RP16871 459 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 RYKP34925 604 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 SFTPDP35247 375 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 PGM1P36871 562 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 SLC6A8P48029 635 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 MNAT1P51948 309 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 SESN3P58005 492 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 FOXF2Q12947 444 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 SELENBP1Q13228 472 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 PAGE3Q5JUK9 113 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 GDF7Q7Z4P5 450 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 MCEMP1Q8IX19 187 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 CNEP1R1Q8N9A8 125 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 FAM71CQ8NEG0 241 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 OR10D3Q8NH80 312 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 OR2V1Q8NHB1 315 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 ZNF563Q8TA94 476 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 FNDC9Q8TBE3 224 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 SLC38A5Q8WUX1 472 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 ST8SIA1Q92185 356 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 FIG4Q92562 907 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 ZNF845Q96IR2 970 aaPredicted RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 KLHL15Q96M94 604 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 TREX2Q9BQ50 279 aaPredicted RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 TIGARQ9NQ88 270 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 EXOSC3Q9NQT5 275 aaKnown RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 SERINC1Q9NRX5 453 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 SLC25A37Q9NYZ2 338 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 CORO2BQ9UQ03 480 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 NDUFAF1Q9Y375 327 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 CENPEQ02224 2701 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 A0A0G2JPF8 293 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 A0A1W2PNV4 684 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 CLDN24A6NM45 220 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 HNRNPCL2B2RXH8 293 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 HNRNPCL3B7ZW38 293 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 SYT5O00445 386 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 FBP2O00757 339 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 ADAMDEC1O15204 470 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 CXCL13O43927 109 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 PLGP00747 810 aaPredicted RBP9.3□□□□□ -0.92
SDF2-208ENST00000589788 HNRNPCL4P0DMR1 293 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 UQCRBP14927 111 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 HOXB9P17482 250 aaPredicted RBP9.3□□□□□ -0.92
SDF2-208ENST00000589788 IL11P20809 199 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 RPS4Y1P22090 263 aaKnown RBP9.3□□□□□ -0.92
SDF2-208ENST00000589788 SLC7A1P30825 629 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 CPA2P48052 419 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 CARD18P57730 90 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 MERTKQ12866 999 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 MYBPHQ13203 477 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 LARS2Q15031 903 aaKnown RBP9.3□□□□□ -0.92
SDF2-208ENST00000589788 FXNQ16595 210 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 TMEM176BQ3YBM2 270 aaPredicted RBP9.3□□□□□ -0.92
SDF2-208ENST00000589788 MMEL1Q495T6 779 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 LIN52Q52LA3 116 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms