RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 OR4D9Q8NGE8 314 aa2.47□□□□□ -2.01
SMAD4-207ENST00000589076 PAQR8Q8TEZ7 354 aa2.47□□□□□ -2.01
SMAD4-207ENST00000589076 COQ2Q96H96 371 aa2.47□□□□□ -2.01
SMAD4-207ENST00000589076 CCNL2Q96S94 520 aaPredicted RBP2.47□□□□□ -2.01
SMAD4-207ENST00000589076 NICN1Q9BSH3 213 aa2.47□□□□□ -2.01
SMAD4-207ENST00000589076 RNF126Q9BV68 326 aa2.47□□□□□ -2.01
SMAD4-207ENST00000589076 YTHDF1Q9BYJ9 559 aaKnown RBP2.47□□□□□ -2.01
SMAD4-207ENST00000589076 RAB34Q9BZG1 259 aa2.47□□□□□ -2.01
SMAD4-207ENST00000589076 PTGES2Q9H7Z7 377 aa2.47□□□□□ -2.01
SMAD4-207ENST00000589076 UFSP2Q9NUQ7 469 aa2.47□□□□□ -2.01
SMAD4-207ENST00000589076 SMPD3Q9NY59 655 aaPredicted RBP2.47□□□□□ -2.01
SMAD4-207ENST00000589076 IL36GQ9NZH8 169 aa2.47□□□□□ -2.01
SMAD4-207ENST00000589076 PRPF19Q9UMS4 504 aaKnown RBP2.47□□□□□ -2.01
SMAD4-207ENST00000589076 UBQLN1Q9UMX0 589 aaKnown RBP2.47□□□□□ -2.01
SMAD4-207ENST00000589076 RLFQ13129 1914 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 TRAV26-1A0A087WT03 109 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 TUBAL3A6NHL2 446 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 F5H6K3 240 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 OR10H3O60404 316 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 SLITRK3O94933 977 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 CAPN1P07384 714 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 DBTP11182 482 aaKnown RBP2.46□□□□□ -2.02
SMAD4-207ENST00000589076 CCDC130P13994 396 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 COX5AP20674 150 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 RPS8P62241 208 aaKnown RBP2.46□□□□□ -2.02
SMAD4-207ENST00000589076 KLRC3Q07444 240 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 EGFEM1PQ0D2K5 195 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 CHIT1Q13231 466 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 C1orf61Q13536 156 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 RNF212Q495C1 297 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 EOGTQ5NDL2 527 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 TPGS2Q68CL5 300 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 CASC1Q6TDU7 716 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 Q6ZPB1 254 aaPredicted RBP2.46□□□□□ -2.02
SMAD4-207ENST00000589076 ACOT7LQ6ZUV0 252 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 ARCQ7LC44 396 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 TMEM179BQ7Z7N9 219 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 ZNF589Q86UQ0 364 aaPredicted RBP2.46□□□□□ -2.02
SMAD4-207ENST00000589076 MAIP1Q8WWC4 291 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 HTR3CQ8WXA8 447 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 C16orf74Q96GX8 76 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 SLC41A3Q96GZ6 507 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 RBM14Q96PK6 669 aaKnown RBP2.46□□□□□ -2.02
SMAD4-207ENST00000589076 VCX2Q9H322 139 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 LRRN3Q9H3W5 708 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 LRRC40Q9H9A6 602 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 SMOXQ9NWM0 555 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 MARCH5Q9NX47 278 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 PTBP2Q9UKA9 531 aaKnown RBP2.46□□□□□ -2.02
SMAD4-207ENST00000589076 RPAP1Q9BWH6 1393 aaPredicted RBP2.46□□□□□ -2.02
SMAD4-207ENST00000589076 THSD7BQ9C0I4 1608 aa2.46□□□□□ -2.02
SMAD4-207ENST00000589076 TRDCB7Z8K6 153 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 K7N7A8 449 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 HDAC3O15379 428 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 BBOX1O75936 387 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 SNAPINO95295 136 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 AP2A1O95782 977 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 IGHV3-48P01763 117 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 LGALS2P05162 132 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 GABRR1P24046 479 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 GCAP28676 217 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 AQP1P29972 269 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 RPL13AP40429 203 aaKnown RBP2.45□□□□□ -2.02
SMAD4-207ENST00000589076 LEPP41159 167 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 CEBPDP49716 269 aaPredicted RBP2.45□□□□□ -2.02
SMAD4-207ENST00000589076 EFNB2P52799 333 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 RIPK4P57078 832 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 FGL1Q08830 312 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 IL24Q13007 206 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 RIPK1Q13546 671 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 SLC15A2Q16348 729 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 SFT2D3Q587I9 215 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 CENPPQ6IPU0 288 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 KDELC1Q6UW63 502 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 ZCCHC7Q8N3Z6 543 aaKnown RBP2.45□□□□□ -2.02
SMAD4-207ENST00000589076 TMEM252Q8N6L7 170 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 EIF1ADQ8N9N8 165 aaKnown RBP2.45□□□□□ -2.02
SMAD4-207ENST00000589076 BBS1Q8NFJ9 593 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 OR2AP1Q8NGE2 309 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 OR56B4Q8NH76 319 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 MARC2Q969Z3 335 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 PHYHIPLQ96FC7 376 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 SEC22AQ96IW7 307 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 PGLYRP4Q96LB8 373 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 PSKH2Q96QS6 385 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 GAL3ST1Q99999 423 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 SLC39A3Q9BRY0 314 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 TMEM43Q9BTV4 400 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 ZDHHC11Q9H8X9 412 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 POPDC2Q9HBU9 364 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 RAB18Q9NP72 206 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 ABCB10Q9NRK6 738 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 CD274Q9NZQ7 290 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 IL17CQ9P0M4 197 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 POLDIP2Q9Y2S7 368 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 MEMO1Q9Y316 297 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 ARHGAP23Q9P227 1491 aa2.45□□□□□ -2.02
SMAD4-207ENST00000589076 HELTA6NFD8 242 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 IDSB3KWA1 339 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 POLR2DO15514 142 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms