RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 PHF1O43189 567 aaPredicted RBP12.3□□□□□ -0.44
VMP1-209ENST00000588915 FCMRO60667 390 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 RAD51DO75771 328 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 CYP7B1O75881 506 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 SLU7O95391 586 aaKnown RBP12.3□□□□□ -0.44
VMP1-209ENST00000588915 ALDH3A1P30838 453 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 H3F3AP84243 136 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 CHRNB3Q05901 458 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 GABRA6Q16445 453 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 GRINAQ7Z429 371 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 C4orf33Q8N1A6 199 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 C17orf78Q8N4C9 275 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 KRTCAP2Q8N6L1 136 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 C1orf162Q8NEQ5 155 aaPredicted RBP12.3□□□□□ -0.44
VMP1-209ENST00000588915 OR5D16Q8NGK9 328 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 OR52N5Q8NH56 324 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 UBLCP1Q8WVY7 318 aaPredicted RBP12.3□□□□□ -0.44
VMP1-209ENST00000588915 RHOXF2Q9BQY4 288 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 AMBRA1Q9C0C7 1298 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 SAP130Q9H0E3 1048 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 FKRPQ9H9S5 495 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 CHRNA9Q9UGM1 479 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 DCTN4Q9UJW0 460 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 PRDM4Q9UKN5 801 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 PMF1-BGLAPU3KQ54 211 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 YLPM1P49750 1951 aaKnown RBP12.29□□□□□ -0.44
VMP1-209ENST00000588915 PDLIM1O00151 329 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 RNASET2O00584 256 aaKnown RBP12.29□□□□□ -0.44
VMP1-209ENST00000588915 EIF1BO60739 113 aaKnown RBP12.29□□□□□ -0.44
VMP1-209ENST00000588915 UBTFL6P0CB48 400 aaPredicted RBP12.29□□□□□ -0.44
VMP1-209ENST00000588915 TFPIP10646 304 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 PTNP21246 168 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 PAX7P23759 505 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 APOBEC3AP31941 199 aaPredicted RBP12.29□□□□□ -0.44
VMP1-209ENST00000588915 PGM1P36871 562 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 MAGEA8P43361 318 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 HTR3AP46098 478 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 ZNF83P51522 516 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 MAP2K6P52564 334 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 EFNA4P52798 201 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 CASP9P55211 416 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 CLDN8P56748 225 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 EMX2Q04743 252 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 CHRNEQ04844 493 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 OR8J2Q8NGG1 315 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 OR5AK3PQ8NH89 298 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 KIF18AQ8NI77 898 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 ZNF563Q8TA94 476 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 C10orf105Q8TEF2 133 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 PMM1Q92871 262 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 APOPT1Q96IL0 206 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 C3orf30Q96M34 536 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 ZIM3Q96PE6 472 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 C1orf50Q9BV19 199 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 EXOSC3Q9NQT5 275 aaKnown RBP12.29□□□□□ -0.44
VMP1-209ENST00000588915 ASIC5Q9NY37 505 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 GIMAP2Q9UG22 337 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 MKLN1Q9UL63 735 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 PCDHGB4Q9UN71 923 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 AMDHD2Q9Y303 409 aa12.29□□□□□ -0.44
VMP1-209ENST00000588915 NDUFS8O00217 210 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 KIAA0513O60268 411 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 IGHV3-9P01782 118 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 USF1P22415 310 aaPredicted RBP12.28□□□□□ -0.44
VMP1-209ENST00000588915 NTF4P34130 210 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 SOAT1P35610 550 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 GZMKP49863 264 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 LSM11P83369 360 aaKnown RBP eCLIP12.28□□□□□ -0.44
VMP1-209ENST00000588915 TGFBR3Q03167 851 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 ATAD3BQ5T9A4 648 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 C16orf62Q7Z3J2 963 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 ADGRG3Q86Y34 549 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 RIBC1Q8N443 379 aaPredicted RBP12.28□□□□□ -0.44
VMP1-209ENST00000588915 ZNF525Q8N782 197 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.28□□□□□ -0.44
VMP1-209ENST00000588915 BOD1Q96IK1 185 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 ARL5BQ96KC2 179 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 SLC35G5Q96KT7 338 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 SHARPINQ9H0F6 387 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 SERHL2Q9H4I8 314 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 CTPS2Q9NRF8 586 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 TMEM181Q9P2C4 612 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 ZDHHC2Q9UIJ5 367 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 WDR45Q9Y484 360 aa12.28□□□□□ -0.44
VMP1-209ENST00000588915 SMIM23A6NLE4 172 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 M0R1B8 84 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 ZNF208O43345 1280 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 LMX1BO60663 402 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 ITGA5P08648 1049 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 G6PDP11413 515 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 RPS26P62854 115 aaKnown RBP12.27□□□□□ -0.45
VMP1-209ENST00000588915 MAPK14Q16539 360 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 PGS1Q32NB8 556 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 TYW3Q6IPR3 259 aaKnown RBP12.27□□□□□ -0.45
VMP1-209ENST00000588915 B3GLCTQ6Y288 498 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 WDR31Q8NA23 367 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 VPS37AQ8NEZ2 397 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 EPS8L3Q8TE67 593 aaKnown RBP12.27□□□□□ -0.45
VMP1-209ENST00000588915 XAGE5Q8WWM1 108 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 TUBGCP3Q96CW5 907 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms