RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 MRPL3P09001 348 aaKnown RBP17.14■□□□□ 0.34
DDX39A-206ENST00000587730 ACVR1BP36896 505 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 KLF9Q13886 244 aaPredicted RBP17.14■□□□□ 0.34
DDX39A-206ENST00000587730 CAMK1Q14012 370 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 ZNF550Q7Z398 422 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 ZNF680Q8NEM1 530 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 OR5J2Q8NH18 312 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 ZFPM2Q8WW38 1151 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 HOXB13Q92826 284 aaPredicted RBP17.14■□□□□ 0.34
DDX39A-206ENST00000587730 DHRS9Q9BPW9 319 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 MEPEQ9NQ76 525 aaPredicted RBP17.14■□□□□ 0.34
DDX39A-206ENST00000587730 SERGEFQ9UGK8 458 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 COLQQ9Y215 455 aaPredicted RBP17.14■□□□□ 0.34
DDX39A-206ENST00000587730 NPTNQ9Y639 398 aa17.14■□□□□ 0.34
DDX39A-206ENST00000587730 TRPM6Q9BX84 2022 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 TRABD2BA6NFA1 517 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 PPM1BO75688 479 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 NKX2-2O95096 273 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 NDUFB2O95178 105 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 TGM6O95932 706 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 IL9P15248 144 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 ATF1P18846 271 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 CLDN2P57739 230 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 ELFN2Q5R3F8 820 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 YAF2Q8IY57 180 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 ZNF527Q8NB42 609 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 OR51A7Q8NH64 312 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 ZNF671Q8TAW3 534 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 ZCCHC10Q8TBK6 192 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 HSD17B8Q92506 261 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 SORCS2Q96PQ0 1159 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 SFXN1Q9H9B4 322 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 SLCO1C1Q9NYB5 712 aa17.14■□□□□ 0.33
DDX39A-206ENST00000587730 LRRC72A6NJI9 287 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 PEX12O00623 359 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 GPR171O14626 319 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 PEX14O75381 377 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 PSMD4P55036 377 aaKnown RBP17.13■□□□□ 0.33
DDX39A-206ENST00000587730 IL10RAQ13651 578 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 PON3Q15166 354 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 UNQ9370/PRO34162Q6UXP9 181 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 IDO2Q6ZQW0 420 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 OR14A16Q8NHC5 309 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 OR14C36Q8NHC7 312 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 SNX33Q8WV41 574 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 NXPE2Q96DL1 559 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 ZFP3Q96NJ6 502 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 FGF22Q9HCT0 170 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-206ENST00000587730 TBC1D29Q9UFV1 150 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 NUP50Q9UKX7 468 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 ICAM5Q9UMF0 924 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 ENTPD2Q9Y5L3 495 aa17.13■□□□□ 0.33
DDX39A-206ENST00000587730 TRAV27A0A087WT01 109 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 A0A1B0GWA3 101 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 A0A1W2PRG6 482 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 ICMTO60725 284 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 TSC22D2O75157 780 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 IFNA16P05015 189 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 CD3GP09693 182 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 FUT1P19526 365 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 GABRA3P34903 492 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 SRP9P49458 86 aaKnown RBP17.12■□□□□ 0.33
DDX39A-206ENST00000587730 GPR143P51810 404 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 DGCR2P98153 550 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 ZNHIT3Q15649 155 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-206ENST00000587730 PRICKLE4Q2TBC4 344 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 METTL11BQ5VVY1 283 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 ULK3Q6PHR2 472 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 CACUL1Q86Y37 369 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 OR4N5Q8IXE1 308 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 GIMAP1Q8WWP7 306 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 PELI1Q96FA3 418 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 CCNL2Q96S94 520 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-206ENST00000587730 ZFYVE21Q9BQ24 234 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 IL21RQ9HBE5 538 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 MCCC2Q9HCC0 563 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 MKKSQ9NPJ1 570 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-206ENST00000587730 MAT2BQ9NZL9 334 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 EIF3KQ9UBQ5 218 aaKnown RBP17.12■□□□□ 0.33
DDX39A-206ENST00000587730 CHRNA9Q9UGM1 479 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 KCNE5Q9UJ90 142 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 PILRAQ9UKJ1 303 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 LINC01553A4QN01 128 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 B8ZZF3 427 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 GABARAPH6UMI1 98 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 KHNYNO15037 678 aaKnown RBP17.12■□□□□ 0.33
DDX39A-206ENST00000587730 SSNA1O43805 119 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 FCARP24071 287 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 DNASE1P24855 282 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 UQCRC1P31930 480 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 TNFRSF4P43489 277 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 DIO1P49895 249 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 CCR9P51686 369 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 RAB14P61106 215 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 SNTA1Q13424 505 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 C2orf27AQ580R0 203 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 CLLU1Q5K131 121 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 FIGLAQ6QHK4 219 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 SLC35F2Q8IXU6 374 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms