RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 CACNG6Q9BXT2 260 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 YAE1D1Q9NRH1 226 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 ASB6Q9NWX5 421 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 MALT1Q9UDY8 824 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 PCDHGB4Q9UN71 923 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 MGAT4BQ9UQ53 548 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 YLPM1P49750 1951 aaKnown RBP17.05■□□□□ 0.32
TRAF4-216ENST00000586813 CIB4A0PJX0 185 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 ANKRD28O15084 1053 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 DNPH1O43598 174 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 TYROBPO43914 113 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 SCN2BO60939 215 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 RYKP34925 604 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 NUDT6P53370 316 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 SLC16A1P53985 500 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 IRX1P78414 480 aaPredicted RBP17.04■□□□□ 0.32
TRAF4-216ENST00000586813 C11orf71Q6IPW1 123 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 HMBOX1Q6NT76 420 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 EMBQ6PCB8 327 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 FRRS1Q6ZNA5 592 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 HIPK1Q86Z02 1210 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 XAGE5Q8WWM1 108 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 ROPN1LQ96C74 230 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 DNAJA3Q96EY1 480 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 ADAD1Q96M93 576 aaKnown RBP17.04■□□□□ 0.32
TRAF4-216ENST00000586813 RHNO1Q9BSD3 238 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 DPY30Q9C005 99 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 OR11A1Q9GZK7 315 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 SAP130Q9H0E3 1048 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 AKTIPQ9H8T0 292 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 TAS2R16Q9NYV7 291 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 HDGFL3Q9Y3E1 203 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 SLC25A15Q9Y619 301 aa17.04■□□□□ 0.32
TRAF4-216ENST00000586813 IGHV4-30-2A0A087WSY4 118 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 CCT8L1PA6NM43 557 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 E7EQL1 145 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 GPR171O14626 319 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 ITM2AO43736 263 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 DHRS4L1P0CG22 281 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 UQCRC2P22695 453 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 PTAFRP25105 342 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 TTKP33981 857 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 NTF4P34130 210 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 KHKP50053 298 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 ZNF83P51522 516 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 PLAURQ03405 335 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 CHRNEQ04844 493 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 AP1ARQ63HQ0 302 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 SAXO2Q658L1 398 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 SLC22A25Q6T423 547 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 KLHL17Q6TDP4 642 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 HMGN2P46Q86SG4 172 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 ZNF781Q8N8C0 355 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 PKNOX2Q96KN3 472 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 DHRS9Q9BPW9 319 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 ROPN1BQ9BZX4 212 aaPredicted RBP17.03■□□□□ 0.32
TRAF4-216ENST00000586813 ROPN1Q9HAT0 212 aaPredicted RBP17.03■□□□□ 0.32
TRAF4-216ENST00000586813 EXOSC3Q9NQT5 275 aaKnown RBP17.03■□□□□ 0.32
TRAF4-216ENST00000586813 CBLN4Q9NTU7 201 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 POU2F3Q9UKI9 436 aa17.03■□□□□ 0.32
TRAF4-216ENST00000586813 HEATR1Q9H583 2144 aaKnown RBP17.03■□□□□ 0.32
TRAF4-216ENST00000586813 A0A096LNT2 108 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 PRSS51A0A1B0GVH4 220 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 A0A1W2PR80 420 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 CLDN24A6NM45 220 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 MRPL33O75394 65 aaKnown RBP17.02■□□□□ 0.32
TRAF4-216ENST00000586813 CPSF4O95639 269 aaKnown RBP17.02■□□□□ 0.32
TRAF4-216ENST00000586813 CD40P25942 277 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 FKBP2P26885 142 aaKnown RBP17.02■□□□□ 0.32
TRAF4-216ENST00000586813 CLK1P49759 484 aaKnown RBP17.02■□□□□ 0.32
TRAF4-216ENST00000586813 PHC1P78364 1004 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 ANXA8L1Q5VT79 327 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 PODNL1Q6PEZ8 512 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 B3GLCTQ6Y288 498 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 ADGRG3Q86Y34 549 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 NUDCD3Q8IVD9 361 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 CCDC103Q8IW40 242 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 ARFGAP2Q8N6H7 521 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 TESCQ96BS2 214 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 ZG16BQ96DA0 208 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 NEURL3Q96EH8 262 aa17.02■□□□□ 0.32
TRAF4-216ENST00000586813 ALPK2Q86TB3 2170 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 PRAMEF27A3QJZ7 478 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 A8MV72 311 aaPredicted RBP17.01■□□□□ 0.31
TRAF4-216ENST00000586813 GPRIN2O60269 458 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 SERPINE1P05121 402 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 ITGA5P08648 1049 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 MAGEA8P43361 318 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 FOXG1P55316 489 aaPredicted RBP17.01■□□□□ 0.31
TRAF4-216ENST00000586813 OR2B6P58173 313 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 VSNL1P62760 191 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 KCNJ10P78508 379 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 HPCAP84074 193 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 GABRA6Q16445 453 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 GPAT3Q53EU6 434 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 OR7E24Q6IFN5 339 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 CLEC2AQ6UVW9 174 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 MUC15Q8N387 334 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 VPS37AQ8NEZ2 397 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 OR10H5Q8NGA6 315 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms