RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 WFDC6Q9BQY6 131 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 CALHM2Q9HA72 323 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 FAM215AQ9Y5M1 114 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 FLNCQ14315 2725 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 TPST2O60704 377 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 PDE5AO76074 875 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 OR1Q1Q15612 314 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 TMEM176BQ3YBM2 270 aaPredicted RBP17.23■□□□□ 0.35
DDX39A-204ENST00000586558 MTX3Q5HYI7 312 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 ALG10BQ5I7T1 473 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 HBMQ6B0K9 141 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 RTL6Q6ICC9 239 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 FKBP9P1Q75LS8 142 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 FJX1Q86VR8 437 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 OR4D11Q8NGI4 311 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 POP5Q969H6 163 aaKnown RBP17.23■□□□□ 0.35
DDX39A-204ENST00000586558 DDIT4LQ96D03 193 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 ASB9Q96DX5 294 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 SLC47A1Q96FL8 570 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 HSH2DQ96JZ2 352 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 TIGARQ9NQ88 270 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.23■□□□□ 0.35
DDX39A-204ENST00000586558 ZNF175Q9Y473 711 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 GTF3C1Q12789 2109 aa17.23■□□□□ 0.35
DDX39A-204ENST00000586558 MED12Q93074 2177 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 A0A0B4J2E0 115 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 A0A0J9YW62 118 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 A0A1B0GX12 115 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 ELOA3DA6NLF2 546 aaPredicted RBP17.22■□□□□ 0.35
DDX39A-204ENST00000586558 CLCA1A8K7I4 914 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 H0YC42 278 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 STAMBPO95630 424 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 IFNW1P05000 195 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 TFPIP10646 304 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 TNFRSF1BP20333 461 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 SHC1P29353 583 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 TPD52P55327 224 aaPredicted RBP17.22■□□□□ 0.35
DDX39A-204ENST00000586558 ELOA3BQ3SY89 546 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 LCN8Q6JVE9 175 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 PGM2L1Q6PCE3 622 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 VTCN1Q7Z7D3 282 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 RBM45Q8IUH3 476 aaKnown RBP17.22■□□□□ 0.35
DDX39A-204ENST00000586558 ATP6V1C2Q8NEY4 427 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 ELOA3Q8NG57 546 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 OR10D3Q8NH80 312 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 WNT2BQ93097 391 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 SLC38A4Q969I6 547 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 MCUR1Q96AQ8 359 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 TRIB1Q96RU8 372 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 TTYH2Q9BSA4 534 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 LRMDAQ9H2I8 198 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 CLCF1Q9UBD9 225 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 HDGFL3Q9Y3E1 203 aa17.22■□□□□ 0.35
DDX39A-204ENST00000586558 HIVEP3Q5T1R4 2406 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 TRAPPC13A5PLN9 417 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 A8MVM7 634 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 TNFSF11O14788 317 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 OPN1LWP04000 364 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 FCGR2AP12318 317 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 EIF1AXP47813 144 aaKnown RBP17.21■□□□□ 0.35
DDX39A-204ENST00000586558 OR1E2P47887 323 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 CARD18P57730 90 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 TRAP1Q12931 704 aaKnown RBP17.21■□□□□ 0.35
DDX39A-204ENST00000586558 SGCBQ16585 318 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 ENTPD8Q5MY95 495 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 C5orf46Q6UWT4 87 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 RPTNQ6XPR3 784 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 DHFR2Q86XF0 187 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 OR10Q1Q8NGQ4 319 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 ADAMTS16Q8TE57 1224 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 CCDC124Q96CT7 223 aaKnown RBP17.21■□□□□ 0.35
DDX39A-204ENST00000586558 CLPTM1LQ96KA5 538 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 OR5B2Q96R09 309 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 TM9SF2Q99805 663 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 PRR14Q9BWN1 585 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 POTEKPQ9BYX7 375 aa17.21■□□□□ 0.35
DDX39A-204ENST00000586558 MMADHCQ9H3L0 296 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-204ENST00000586558 ERRFI1Q9UJM3 462 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-204ENST00000586558 GCN1Q92616 2671 aaKnown RBP17.2■□□□□ 0.34
DDX39A-204ENST00000586558 TMEM72A0PK05 275 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 MBD3L4A6NDZ8 208 aaPredicted RBP17.2■□□□□ 0.34
DDX39A-204ENST00000586558 MBD3L3A6NE82 208 aaPredicted RBP17.2■□□□□ 0.34
DDX39A-204ENST00000586558 MBD3L5A6NJ08 208 aaPredicted RBP17.2■□□□□ 0.34
DDX39A-204ENST00000586558 SLC22A20A6NK97 555 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 CPSF4LA6NMK7 179 aaKnown RBP17.2■□□□□ 0.34
DDX39A-204ENST00000586558 GSC2O15499 205 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 DNPH1O43598 174 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 CHP2O43745 196 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 CXCL13O43927 109 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 PRKD3O94806 890 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 SYNGR4O95473 234 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 GLI4P10075 376 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 CCNA2P20248 432 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 IFNA8P32881 189 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 TIMP3P35625 211 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 CSNK2A1P68400 391 aaPredicted RBP17.2■□□□□ 0.34
DDX39A-204ENST00000586558 RIPPLY2Q5TAB7 128 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 DEF8Q6ZN54 512 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 TMPPEQ6ZT21 453 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 RPRMLQ8N4K4 120 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms