RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 DOC2BQ14184 412 aa20.34■□□□□ 0.85
CIRBP-208ENST00000586548 SLC35F1Q5T1Q4 408 aa20.34■□□□□ 0.85
CIRBP-208ENST00000586548 NIPAL3Q6P499 406 aa20.34■□□□□ 0.85
CIRBP-208ENST00000586548 PLBD1Q6P4A8 553 aa20.34■□□□□ 0.85
CIRBP-208ENST00000586548 ARHGAP11AQ6P4F7 1023 aa20.34■□□□□ 0.85
CIRBP-208ENST00000586548 AMER2Q8N7J2 671 aa20.34■□□□□ 0.85
CIRBP-208ENST00000586548 OR5L2Q8NGL0 311 aa20.34■□□□□ 0.85
CIRBP-208ENST00000586548 ZBTB20Q9HC78 741 aaPredicted RBP20.34■□□□□ 0.85
CIRBP-208ENST00000586548 PCDHGA3Q9Y5H0 932 aa20.34■□□□□ 0.85
CIRBP-208ENST00000586548 TMEM129A0AVI4 362 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 SOCS6O14544 535 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 CLPXO76031 633 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 PEPDP12955 493 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 HK1P19367 917 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 PGCP20142 388 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.33■□□□□ 0.857e-8■■□□□ 13.6
CIRBP-208ENST00000586548 MLLT11Q13015 90 aaPredicted RBP20.33■□□□□ 0.85
CIRBP-208ENST00000586548 TIMM50Q3ZCQ8 353 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 PAQR6Q6TCH4 344 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 FAM198BQ6UWH4 519 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 OR5W2Q8NH69 310 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 MR1Q95460 341 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 SLC39A1Q9NY26 324 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 AKAP7Q9P0M2 348 aaPredicted RBP20.33■□□□□ 0.85
CIRBP-208ENST00000586548 MYO15AQ9UKN7 3530 aa20.33■□□□□ 0.85
CIRBP-208ENST00000586548 FAM183AA6NL82 134 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 C9J4A7 227 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 PRR23D1E9PI22 279 aaPredicted RBP20.33■□□□□ 0.84
CIRBP-208ENST00000586548 IFNGP01579 166 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 PRR23D2P0DMB1 279 aaPredicted RBP20.33■□□□□ 0.84
CIRBP-208ENST00000586548 ZNF3P17036 446 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 TMED1Q13445 227 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 ARMC4Q5T2S8 1044 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 ATCAYQ86WG3 371 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 MISPQ8IVT2 679 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 DYNC2LI1Q8TCX1 351 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 LIPHQ8WWY8 451 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 C8orf44Q96CB5 159 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 ZHX1-C8orf76Q96EF9 292 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 ULBP3Q9BZM4 244 aa20.33■□□□□ 0.84
CIRBP-208ENST00000586548 KMT2EQ8IZD2 1858 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 TMEM200CA6NKL6 621 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 SCO2O43819 266 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 CDC40O60508 579 aaKnown RBP eCLIP20.32■□□□□ 0.84
CIRBP-208ENST00000586548 APOL3O95236 402 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 NADKO95544 446 aaPredicted RBP20.32■□□□□ 0.84
CIRBP-208ENST00000586548 NAGAP17050 411 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 ITPKBP27987 946 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 TACR3P29371 465 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 UGT2B10P36537 528 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 P2RX1P51575 399 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 WNT4P56705 351 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 RPS4XP62701 263 aaKnown RBP20.32■□□□□ 0.84
CIRBP-208ENST00000586548 CBFBQ13951 182 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 SSX1Q16384 188 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 MEPCEQ7L2J0 689 aaKnown RBP20.32■□□□□ 0.84
CIRBP-208ENST00000586548 NUP54Q7Z3B4 507 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 PMEPA1Q969W9 287 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 OTULINQ96BN8 352 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 ZNF524Q96C55 264 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 CMKLR1Q99788 373 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 KLHDC3Q9BQ90 382 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 JAM3Q9BX67 310 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 R4GN57 208 aa20.32■□□□□ 0.84
CIRBP-208ENST00000586548 LOC102723996A0A087X1L8 192 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 TNFRSF10AO00220 468 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 ZFAND5O76080 213 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 IGHA1P01876 353 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 LIMK1P53667 647 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 ITGADQ13349 1161 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 DGUOKQ16854 277 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 ZNF362Q5T0B9 420 aaPredicted RBP20.31■□□□□ 0.84
CIRBP-208ENST00000586548 FAM199XQ6PEV8 388 aaPredicted RBP20.31■□□□□ 0.84
CIRBP-208ENST00000586548 ZNF517Q6ZMY9 492 aaPredicted RBP20.31■□□□□ 0.84
CIRBP-208ENST00000586548 C16orf47Q6ZP98 133 aaPredicted RBP20.31■□□□□ 0.84
CIRBP-208ENST00000586548 LRRC17Q8N6Y2 441 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 PSD4Q8NDX1 1056 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 THAP3Q8WTV1 239 aaPredicted RBP20.31■□□□□ 0.84
CIRBP-208ENST00000586548 DEPDC7Q96QD5 511 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 OR51E2Q9H255 320 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 CHRNA9Q9UGM1 479 aa20.31■□□□□ 0.84
CIRBP-208ENST00000586548 LRRN3E7EW58 273 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 NOS3P29474 1203 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 PRPS1P60891 318 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 TUBA1BP68363 451 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 ZNF74Q16587 644 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 DPY19L2P2Q6ZN68 376 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 USP43Q70EL4 1123 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 TUBA1AQ71U36 451 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 SHFQ7M4L6 423 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 SLC37A3Q8NCC5 494 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 OR4F15Q8NGB8 312 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 OR5M3Q8NGP4 307 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 NACC2Q96BF6 587 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 TMCO6Q96DC7 493 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 ERMAPQ96PL5 475 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-208ENST00000586548 COL25A1Q9BXS0 654 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-208ENST00000586548 DCSTAMPQ9H295 470 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 MED20Q9H944 212 aa20.3■□□□□ 0.84
CIRBP-208ENST00000586548 ISYNA1Q9NPH2 558 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms