RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CSF3P09919 207 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 NR4A2P43354 598 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 GZMKP49863 264 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 CSNK2A1P68400 391 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-225ENST00000586385 H3F3AP84243 136 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 FUT5Q11128 374 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 GGTLC2Q14390 218 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 GPR68Q15743 365 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 SPDYE7PQ495Y7 208 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 AP1ARQ63HQ0 302 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 KLHL17Q6TDP4 642 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 ADGRG3Q86Y34 549 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 DDIASQ8IXT1 998 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 GSPT2Q8IYD1 628 aaKnown RBP10.39□□□□□ -0.75
BRCA1-225ENST00000586385 CLECL1Q8IZS7 167 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 ZG16BQ96DA0 208 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 C1orf159Q96HA4 380 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 FOXN4Q96NZ1 517 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 CHODLQ9H9P2 273 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 SLC17A5Q9NRA2 495 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 SLC7A10Q9NS82 523 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 ATP23Q9Y6H3 246 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 ARFGEF3Q5TH69 2177 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 LOC100289279A0A1B0GTE1 492 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 PRAMEF27A3QJZ7 478 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 CLDN24A6NM45 220 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 KIAA0513O60268 411 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 TRIM13O60858 407 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 C1QCP02747 245 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 KRT16P08779 473 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 TFPIP10646 304 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 APOBEC3AP31941 199 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-225ENST00000586385 CCT5P48643 541 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 PHC1P78364 1004 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 ARHGAP11BQ3KRB8 267 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 C6orf136Q5SQH8 315 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 TSPO2Q5TGU0 170 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 OR7E24Q6IFN5 339 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 FAM166AQ6J272 317 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 EMBQ6PCB8 327 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 C6orf120Q7Z4R8 191 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 HMGN2P46Q86SG4 172 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 C4orf33Q8N1A6 199 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 ANKS4BQ8N8V4 417 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 CCDC63Q8NA47 563 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 PIGXQ8TBF5 258 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 SLC25A43Q8WUT9 341 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-225ENST00000586385 TRMOQ9BU70 441 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 MECRQ9BV79 373 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 BHLHE41Q9C0J9 482 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-225ENST00000586385 SERINC1Q9NRX5 453 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 CHRNA9Q9UGM1 479 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 KCNS2Q9ULS6 477 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 FLVCR1Q9Y5Y0 555 aa10.38□□□□□ -0.75
BRCA1-225ENST00000586385 NUP214P35658 2090 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-225ENST00000586385 TMEM114B3SHH9 223 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 HAX1O00165 279 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 GPR171O14626 319 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 DNPH1O43598 174 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 MRPL33O75394 65 aaKnown RBP10.37□□□□□ -0.75
BRCA1-225ENST00000586385 STX11O75558 287 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 IMPDH2P12268 514 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 PGCP20142 388 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 MATN1P21941 496 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 ALDH3A1P30838 453 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 RYKP34925 604 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 APOBEC1P41238 236 aaKnown RBP10.37□□□□□ -0.75
BRCA1-225ENST00000586385 PDLIM4P50479 330 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 SLC17A1Q14916 467 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 LSM12Q3MHD2 195 aaKnown RBP10.37□□□□□ -0.75
BRCA1-225ENST00000586385 IL23RQ5VWK5 629 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 TYW3Q6IPR3 259 aaKnown RBP10.37□□□□□ -0.75
BRCA1-225ENST00000586385 FRRS1Q6ZNA5 592 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 ZIC4Q8N9L1 334 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 C1orf162Q8NEQ5 155 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-225ENST00000586385 AGR3Q8TD06 166 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 MIPOL1Q8TD10 442 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 TMEM234Q8WY98 164 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 ARL8AQ96BM9 186 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 MOAP1Q96BY2 351 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 FBXO17Q96EF6 278 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 PPP3R2Q96LZ3 170 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 DUSP26Q9BV47 211 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 SAP130Q9H0E3 1048 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 DCTN4Q9UJW0 460 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 MOKQ9UQ07 419 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 HDGFL3Q9Y3E1 203 aa10.37□□□□□ -0.75
BRCA1-225ENST00000586385 TMEM72A0PK05 275 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 ZC3H12DA2A288 527 aaKnown RBP10.36□□□□□ -0.75
BRCA1-225ENST00000586385 COPEO14579 308 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 AP3D1O14617 1153 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 SCN2BO60939 215 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 LYPLA1O75608 230 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-225ENST00000586385 SLU7O95391 586 aaKnown RBP10.36□□□□□ -0.75
BRCA1-225ENST00000586385 CHEK2O96017 543 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 AK1P00568 194 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 G6PDP11413 515 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 DDX5P17844 614 aaKnown RBP10.36□□□□□ -0.75
BRCA1-225ENST00000586385 KRT4P19013 534 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 CCNA2P20248 432 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms