RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 RASSF1Q9NS23 344 aa5.65□□□□□ -1.5
LIG3-206ENST00000586058 MED17Q9NVC6 651 aa5.65□□□□□ -1.5
LIG3-206ENST00000586058 TUBA8Q9NY65 449 aaPredicted RBP5.65□□□□□ -1.5
LIG3-206ENST00000586058 NDRG4Q9ULP0 352 aaKnown RBP5.65□□□□□ -1.5
LIG3-206ENST00000586058 BOKQ9UMX3 212 aaPredicted RBP5.65□□□□□ -1.5
LIG3-206ENST00000586058 POLHQ9Y253 713 aa5.65□□□□□ -1.5
LIG3-206ENST00000586058 ZNF337Q9Y3M9 751 aa5.65□□□□□ -1.5
LIG3-206ENST00000586058 CHST2Q9Y4C5 530 aa5.65□□□□□ -1.5
LIG3-206ENST00000586058 NCKAP5O14513 1909 aa5.65□□□□□ -1.51
LIG3-206ENST00000586058 PCNX3Q9H6A9 2034 aa5.65□□□□□ -1.51
LIG3-206ENST00000586058 TRAV36DV7A0A075B6V5 113 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 TMED7-TICAM2A0A0A6YYA0 188 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 SH3D21A4FU49 640 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 CCDC160A6NGH7 325 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 A8MVM7 634 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 ACOT7O00154 380 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 DLGAP1O14490 977 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 TERTO14746 1132 aaKnown RBP5.64□□□□□ -1.51
LIG3-206ENST00000586058 SUSD5O60279 629 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 MAN1A2O60476 641 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 MRPS14O60783 128 aaKnown RBP5.64□□□□□ -1.51
LIG3-206ENST00000586058 SEMA7AO75326 666 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 BCAS1O75363 584 aaPredicted RBP5.64□□□□□ -1.51
LIG3-206ENST00000586058 NDUFB2O95178 105 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 GNAO1P09471 354 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 TFPIP10646 304 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 LIFP15018 202 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 CCNA2P20248 432 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 PTNP21246 168 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 TTKP33981 857 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 GRK5P34947 590 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 CASP3P42574 277 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 OMPP47874 163 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 HLCSP50747 726 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 NR1H2P55055 460 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 TUBA4AP68366 448 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 MYBPC1Q00872 1141 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 MVKQ03426 396 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 CD47Q08722 323 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 SELENBP1Q13228 472 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 BLMHQ13867 455 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 GINS1Q14691 196 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 RTP5Q14D33 572 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 MAD2L1BPQ15013 274 aaPredicted RBP5.64□□□□□ -1.51
LIG3-206ENST00000586058 SNAPC1Q16533 368 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 RSPO4Q2I0M5 234 aaPredicted RBP5.64□□□□□ -1.51
LIG3-206ENST00000586058 PGGHGQ32M88 737 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 TBC1D25Q3MII6 688 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 ZBED5Q49AG3 693 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 ACER2Q5QJU3 275 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 FAM69AQ5T7M9 428 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 LCN1P1Q5VSP4 162 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 AGAP7PQ5VUJ5 663 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 SLX4IPQ5VYV7 408 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 FCRLBQ6BAA4 426 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 ZNF770Q6IQ21 691 aaPredicted RBP5.64□□□□□ -1.51
LIG3-206ENST00000586058 CBLN3Q6UW01 205 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 TMPRSS11FQ6ZWK6 438 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 PRICKLE2Q7Z3G6 844 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 HDDC2Q7Z4H3 204 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 ZER1Q7Z7L7 766 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 JAZF1Q86VZ6 243 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 PLCZ1Q86YW0 608 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 GID4Q8IVV7 300 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 STX19Q8N4C7 294 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 BPIFB6Q8NFQ5 453 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 PFN4Q8NHR9 129 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 BRIX1Q8TDN6 353 aaKnown RBP5.64□□□□□ -1.51
LIG3-206ENST00000586058 STK35Q8TDR2 534 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 DUSP19Q8WTR2 217 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 KCNE4Q8WWG9 221 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 TM9SF4Q92544 642 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 GATA6Q92908 595 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 ZNF566Q969W8 418 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 ZHX1-C8orf76Q96EF9 292 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 TMEM41AQ96HV5 264 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 MRGPRX4Q96LA9 322 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 C5orf34Q96MH7 638 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 AGAP4Q96P64 663 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 MYCBPQ99417 103 aaPredicted RBP5.64□□□□□ -1.51
LIG3-206ENST00000586058 PRSS27Q9BQR3 290 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 WFDC6Q9BQY6 131 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 TSSK6Q9BXA6 273 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 OR52D1Q9H346 318 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 FKRPQ9H9S5 495 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 GALNT9Q9HCQ5 603 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 ASCL3Q9NQ33 180 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 CHCHD3Q9NX63 227 aaKnown RBP5.64□□□□□ -1.51
LIG3-206ENST00000586058 FLRT3Q9NZU0 649 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 NDUFA13Q9P0J0 144 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 LRFN1Q9P244 771 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 CHRNA9Q9UGM1 479 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 KLHL21Q9UJP4 597 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 ZNF229Q9UJW7 825 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.64□□□□□ -1.51
LIG3-206ENST00000586058 ICAM5Q9UMF0 924 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 VDAC3Q9Y277 283 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 NTNG1Q9Y2I2 539 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 SLC6A5Q9Y345 797 aa5.64□□□□□ -1.51
LIG3-206ENST00000586058 TMED7Q9Y3B3 224 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms