RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 APOOLQ6UXV4 268 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 GDF7Q7Z4P5 450 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 COMTD1Q86VU5 262 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 LACC1Q8IV20 430 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 ZADH2Q8N4Q0 377 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 OR5M3Q8NGP4 307 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 PHOSPHO1Q8TCT1 267 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 TRUB1Q8WWH5 349 aaKnown RBP11.5□□□□□ -0.57
VMP1-202ENST00000585847 TMEM43Q9BTV4 400 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 RSPO3Q9BXY4 272 aaPredicted RBP11.5□□□□□ -0.57
VMP1-202ENST00000585847 MFRPQ9BY79 579 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 GRIP2Q9C0E4 1043 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 TOR3AQ9H497 397 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 FAM118AQ9NWS6 357 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 MED31Q9Y3C7 131 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 COL12A1Q99715 3063 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 FLNCQ14315 2725 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 A0A087WZY1 265 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 NPIPA5A0A0B4J1W7 369 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 CENPVL1A0A0U1RR11 272 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 LOC100130705A0A1B0GUX0 176 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 A0A1B0GWA3 101 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 C17orf51A8MQB3 221 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 FAM47E-STBD1D6RA91 191 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 NPIPA7E9PJI5 369 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 J3KTA2 159 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 BCKDKO14874 412 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 NME2P1O60361 137 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 SNX4O95219 450 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 SNAP29O95721 258 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 ANGPTL1O95841 491 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 SP1P08047 785 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 FREM3P0C091 2139 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 NPIPA8P0DM63 369 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 NME2P22392 152 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 YAP1P46937 504 aaKnown RBP11.49□□□□□ -0.57
VMP1-202ENST00000585847 SLC9A3P48764 834 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 CHN2P52757 468 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 GAS1P54826 345 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 TPD52P55327 224 aaPredicted RBP11.49□□□□□ -0.57
VMP1-202ENST00000585847 CDC42P60953 191 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 CXCR4P61073 352 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 TMEM44Q2T9K0 475 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 KCTD21Q4G0X4 260 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 SLC25A25Q6KCM7 469 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 PODNL1Q6PEZ8 512 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 TBPL2Q6SJ96 375 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 RTL4Q6ZR62 310 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 RASSF6Q6ZTQ3 369 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 THAP5Q7Z6K1 395 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 TMEM179BQ7Z7N9 219 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 RBM45Q8IUH3 476 aaKnown RBP11.49□□□□□ -0.57
VMP1-202ENST00000585847 PSD4Q8NDX1 1056 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 OR6S1Q8NH40 331 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 OR52J3Q8NH60 311 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 B4GALNT2Q8NHY0 566 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 GRHL3Q8TE85 626 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 TMEM239Q8WW34 195 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 CYGBQ8WWM9 190 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 HRASLS5Q96KN8 279 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 SMURF2Q9HAU4 748 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 NDRG4Q9ULP0 352 aaKnown RBP11.49□□□□□ -0.57
VMP1-202ENST00000585847 SLC7A7Q9UM01 511 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 ICAM5Q9UMF0 924 aa11.49□□□□□ -0.57
VMP1-202ENST00000585847 A0A087WUJ7 227 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 A0A087WUU8 490 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 ANKUB1A6NFN9 424 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 E9PQ18 207 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 HCRTR2O43614 444 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 TPST2O60704 377 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 MRPS14O60783 128 aaKnown RBP11.48□□□□□ -0.57
VMP1-202ENST00000585847 SLC25A12O75746 678 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 HTR2AP28223 471 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 EIF1P41567 113 aaKnown RBP11.48□□□□□ -0.57
VMP1-202ENST00000585847 CASP3P42574 277 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 PLAURQ03405 335 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 ZNF169Q14929 603 aaPredicted RBP11.48□□□□□ -0.57
VMP1-202ENST00000585847 INPP5JQ15735 1006 aaPredicted RBP11.48□□□□□ -0.57
VMP1-202ENST00000585847 ZNF766Q5HY98 468 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 C6orf52Q5T4I8 152 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 PRAMEF20Q5VT98 475 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 TTC33Q6PID6 262 aaPredicted RBP11.48□□□□□ -0.57
VMP1-202ENST00000585847 TMPRSS11FQ6ZWK6 438 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 GRINAQ7Z429 371 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 GALNTL5Q7Z4T8 443 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 SULF2Q8IWU5 870 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 TMCO5AQ8N6Q1 288 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 TM9SF4Q92544 642 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 OSTF1Q92882 214 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 FRMD6Q96NE9 622 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 ZNF570Q96NI8 536 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.48□□□□□ -0.57
VMP1-202ENST00000585847 ZNF696Q9H7X3 374 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 PTGES2Q9H7Z7 377 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 METTL7AQ9H8H3 244 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 KLHL1Q9NR64 748 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 KLRF1Q9NZS2 232 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 LUZP4Q9P127 313 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 BAIAP2Q9UQB8 552 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 GMPPBQ9Y5P6 360 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms