RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 SPATA9Q9BWV2 254 aa16.77■□□□□ 0.28
ATG4D-203ENST00000585752 KLHL4Q9C0H6 718 aa16.77■□□□□ 0.28
ATG4D-203ENST00000585752 KCNE5Q9UJ90 142 aa16.77■□□□□ 0.28
ATG4D-203ENST00000585752 SLC13A4Q9UKG4 626 aa16.77■□□□□ 0.28
ATG4D-203ENST00000585752 AP3M1Q9Y2T2 418 aa16.77■□□□□ 0.28
ATG4D-203ENST00000585752 ANKHD1Q8IWZ3 2542 aaKnown RBP16.77■□□□□ 0.28
ATG4D-203ENST00000585752 CCDC168Q8NDH2 2452 aa16.77■□□□□ 0.27
ATG4D-203ENST00000585752 CENPVL1A0A0U1RR11 272 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 CXCL13O43927 109 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 PGM3O95394 542 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 NID1P14543 1247 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 SFTPDP35247 375 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 SLC6A8P48029 635 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 SELPLGQ14242 412 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 TMEM44Q2T9K0 475 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 ZNF311Q5JNZ3 666 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 CBLN3Q6UW01 205 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 GGNQ86UU5 652 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 TREML1Q86YW5 311 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 ZNF610Q8N9Z0 462 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 ATP6V1C2Q8NEY4 427 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 OR6K3Q8NGY3 331 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 ZNF563Q8TA94 476 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 ZG16BQ96DA0 208 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 ZC3HAV1LQ96H79 300 aaKnown RBP16.76■□□□□ 0.27
ATG4D-203ENST00000585752 ALPK1Q96QP1 1244 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 KAT8Q9H7Z6 458 aaKnown RBP16.76■□□□□ 0.27
ATG4D-203ENST00000585752 KLHL28Q9NXS3 571 aa16.76■□□□□ 0.27
ATG4D-203ENST00000585752 ZNF443Q9Y2A4 671 aaPredicted RBP16.76■□□□□ 0.27
ATG4D-203ENST00000585752 GPC6Q9Y625 555 aaPredicted RBP16.76■□□□□ 0.27
ATG4D-203ENST00000585752 SERPINB7O75635 380 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 AQP8O94778 261 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 THBS1P07996 1170 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 ETS2P15036 469 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 ADH6P28332 368 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 UGT2B10P36537 528 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 PCYT1AP49585 367 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 SKP2Q13309 424 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 RABL3Q5HYI8 236 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 MRPL2Q5T653 305 aaKnown RBP16.75■□□□□ 0.27
ATG4D-203ENST00000585752 INTS11Q5TA45 600 aaKnown RBP16.75■□□□□ 0.27
ATG4D-203ENST00000585752 AP1ARQ63HQ0 302 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 SERPINA11Q86U17 422 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 ZNF440Q8IYI8 595 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 BCAS4Q8TDM0 211 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 TMEM234Q8WY98 164 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 OSTF1Q92882 214 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 KLHL15Q96M94 604 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 WFIKKN1Q96NZ8 548 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 HOPXQ9BPY8 73 aaPredicted RBP16.75■□□□□ 0.27
ATG4D-203ENST00000585752 PIF1Q9H611 641 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 BCL2L10Q9HD36 194 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 CLEC4AQ9UMR7 237 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 TESMINQ9Y4I5 508 aa16.75■□□□□ 0.27
ATG4D-203ENST00000585752 DSPPQ9NZW4 1301 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 PRORSD1PA6NEY8 169 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 ADAMDEC1O15204 470 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 OIP5O43482 229 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 HRGP04196 525 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 RPS4Y1P22090 263 aaKnown RBP16.74■□□□□ 0.27
ATG4D-203ENST00000585752 ELK4P28324 431 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 AQP1P29972 269 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 SLC7A1P30825 629 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 RYKP34925 604 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 PGM1P36871 562 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 MXRA7P84157 204 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 FOXF1Q12946 379 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 MAPK11Q15759 364 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 TMEM201Q5SNT2 666 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 ZNF474Q6S9Z5 364 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-203ENST00000585752 BEND4Q6ZU67 534 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 VRK2Q86Y07 508 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 FBXO27Q8NI29 283 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 GPR119Q8TDV5 335 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 SLC26A7Q8TE54 656 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 PIK3IP1Q96FE7 263 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 EXOSC3Q9NQT5 275 aaKnown RBP16.74■□□□□ 0.27
ATG4D-203ENST00000585752 C6orf203Q9P0P8 240 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-203ENST00000585752 ICAM5Q9UMF0 924 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 SPG11Q96JI7 2443 aa16.74■□□□□ 0.27
ATG4D-203ENST00000585752 F8P00451 2351 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 A0A0J9YW62 118 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 CLDN24A6NM45 220 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 FXYD1O00168 92 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 LINGO3P0C6S8 592 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 QPRTQ15274 297 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 ERICH5Q6P6B1 374 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 ZNF836Q6ZNA1 936 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 TGIF2LYQ8IUE0 185 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 ARMC8Q8IUR7 673 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 C10orf111Q8N326 155 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 BHLHE22Q8NFJ8 381 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-203ENST00000585752 CPNE4Q96A23 557 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-203ENST00000585752 MBD6Q96DN6 1003 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 ARSGQ96EG1 525 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 CXXC4Q9H2H0 198 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 PLEKHF2Q9H8W4 249 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 PLSCR4Q9NRQ2 329 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 SERINC1Q9NRX5 453 aa16.73■□□□□ 0.27
ATG4D-203ENST00000585752 TAGLN3Q9UI15 199 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms